Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH3Q96II8 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH3Q96II8 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 COG6-212ENST00000630730 186 ntTSL 5 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 DUX4L33-201ENST00000635217 958 ntBASIC15.01□□□□□ -0.01
LRCH3Q96II8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH3Q96II8 AC104581.4-201ENST00000623126 3052 ntBASIC15.01□□□□□ -0.01
LRCH3Q96II8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH3Q96II8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH3Q96II8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH3Q96II8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH3Q96II8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH3Q96II8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.01□□□□□ -0.01
LRCH3Q96II8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH3Q96II8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH3Q96II8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH3Q96II8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15□□□□□ -0.01
LRCH3Q96II8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LRCH3Q96II8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15□□□□□ -0.01
LRCH3Q96II8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LRCH3Q96II8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LRCH3Q96II8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LRCH3Q96II8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15□□□□□ -0.01
LRCH3Q96II8 MROH4P-201ENST00000431302 1578 ntBASIC15□□□□□ -0.01
LRCH3Q96II8 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC15□□□□□ -0.01
LRCH3Q96II8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LRCH3Q96II8 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC15□□□□□ -0.01
LRCH3Q96II8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC15□□□□□ -0.01
LRCH3Q96II8 AC139143.1-201ENST00000441772 1207 ntBASIC15□□□□□ -0.01
LRCH3Q96II8 JPT1-205ENST00000470924 663 ntTSL 5 BASIC15□□□□□ -0.01
LRCH3Q96II8 AC055748.1-201ENST00000489836 959 ntBASIC15□□□□□ -0.01
LRCH3Q96II8 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC15□□□□□ -0.01
LRCH3Q96II8 AC112694.1-202ENST00000540985 943 ntBASIC15□□□□□ -0.01
LRCH3Q96II8 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 SNX20-205ENST00000610485 557 ntTSL 5 BASIC15□□□□□ -0.01
LRCH3Q96II8 AC139100.2-201ENST00000616901 662 ntBASIC15□□□□□ -0.01
LRCH3Q96II8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15□□□□□ -0.01
LRCH3Q96II8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 AC005840.4-201ENST00000541242 2494 ntBASIC15□□□□□ -0.01
LRCH3Q96II8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LRCH3Q96II8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCH3Q96II8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 AC092135.3-201ENST00000624151 1846 ntBASIC14.99□□□□□ -0.01
LRCH3Q96II8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 SOD1-202ENST00000389995 865 ntTSL 3 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 OR2W2P-201ENST00000406313 909 ntBASIC14.99□□□□□ -0.01
LRCH3Q96II8 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 MTND2P25-201ENST00000449028 610 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms