Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 SIGLEC22P-201ENST00000599104 714 ntBASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 AL353770.1-201ENST00000614915 403 ntBASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 AC092053.3-201ENST00000641308 4975 ntBASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 AC115284.2-201ENST00000624646 2054 ntBASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 AC092573.1-201ENST00000433054 884 ntBASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 FTH1P22-201ENST00000456305 520 ntBASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 SCARNA12-201ENST00000459155 270 ntBASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 AL031673.1-201ENST00000611460 466 ntBASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PDLIM5Q96HC4 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AL583805.1-201ENST00000391389 531 ntBASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AL807761.2-201ENST00000422849 729 ntBASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.53□□□□□ -0.24
PDLIM5Q96HC4 AC005077.2-201ENST00000449786 690 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms