Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 AL035414.1-201ENST00000451327 857 ntBASIC12.41□□□□□ -0.42
RFT1Q96AA3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 KRT90P-201ENST00000549264 1064 ntBASIC12.41□□□□□ -0.42
RFT1Q96AA3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 AC108024.1-201ENST00000626286 1721 ntBASIC12.41□□□□□ -0.42
RFT1Q96AA3 AC006453.4-201ENST00000636949 1252 ntBASIC12.41□□□□□ -0.42
RFT1Q96AA3 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 AC007614.5-201ENST00000623424 8892 ntBASIC12.41□□□□□ -0.42
RFT1Q96AA3 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 AC022364.1-202ENST00000617468 2409 ntBASIC12.4□□□□□ -0.42
RFT1Q96AA3 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.4□□□□□ -0.42
RFT1Q96AA3 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 FAM90A11P-201ENST00000518378 2218 ntBASIC12.4□□□□□ -0.42
RFT1Q96AA3 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 AL512384.1-201ENST00000406683 331 ntBASIC12.4□□□□□ -0.42
RFT1Q96AA3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 AC007551.1-201ENST00000457394 519 ntBASIC12.4□□□□□ -0.42
RFT1Q96AA3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 PPY2P-201ENST00000582808 702 ntBASIC12.4□□□□□ -0.42
RFT1Q96AA3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 AC027307.3-201ENST00000594262 1100 ntBASIC12.4□□□□□ -0.42
RFT1Q96AA3 AC104506.1-201ENST00000609247 429 ntBASIC12.4□□□□□ -0.42
RFT1Q96AA3 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RFT1Q96AA3 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.4□□□□□ -0.42
RFT1Q96AA3 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RFT1Q96AA3 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms