Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 AC093525.8-201ENST00000624099 1342 ntBASIC12.97□□□□□ -0.33
HPS1Q92902 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.97□□□□□ -0.33
HPS1Q92902 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 AGAP12P-201ENST00000585227 2359 ntBASIC12.97□□□□□ -0.33
HPS1Q92902 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.97□□□□□ -0.33
HPS1Q92902 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HPS1Q92902 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.97□□□□□ -0.33
HPS1Q92902 C2orf27AP3-201ENST00000434123 579 ntBASIC12.97□□□□□ -0.33
HPS1Q92902 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.97□□□□□ -0.33
HPS1Q92902 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.97□□□□□ -0.33
HPS1Q92902 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC12.97□□□□□ -0.33
HPS1Q92902 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.97□□□□□ -0.33
HPS1Q92902 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.97□□□□□ -0.33
HPS1Q92902 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
HPS1Q92902 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.97□□□□□ -0.33
HPS1Q92902 AP001582.1-201ENST00000525856 295 ntBASIC12.97□□□□□ -0.33
HPS1Q92902 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
HPS1Q92902 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.97□□□□□ -0.33
HPS1Q92902 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.97□□□□□ -0.33
HPS1Q92902 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.97□□□□□ -0.33
HPS1Q92902 MIR4525-201ENST00000580000 75 ntBASIC12.97□□□□□ -0.33
HPS1Q92902 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.97□□□□□ -0.33
HPS1Q92902 AC008507.2-201ENST00000588402 1176 ntBASIC12.97□□□□□ -0.33
HPS1Q92902 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.97□□□□□ -0.33
HPS1Q92902 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.97□□□□□ -0.33
HPS1Q92902 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.97□□□□□ -0.33
HPS1Q92902 AL354718.3-201ENST00000616414 581 ntBASIC12.97□□□□□ -0.33
HPS1Q92902 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.97□□□□□ -0.33
HPS1Q92902 CR382287.1-201ENST00000623954 586 ntBASIC12.97□□□□□ -0.33
HPS1Q92902 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HPS1Q92902 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HPS1Q92902 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.97□□□□□ -0.33
HPS1Q92902 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.97□□□□□ -0.33
HPS1Q92902 AC060814.4-201ENST00000594169 2163 ntBASIC12.97□□□□□ -0.33
HPS1Q92902 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HPS1Q92902 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HPS1Q92902 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
HPS1Q92902 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
HPS1Q92902 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.97□□□□□ -0.33
HPS1Q92902 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC12.97□□□□□ -0.33
HPS1Q92902 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.96□□□□□ -0.33
HPS1Q92902 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
HPS1Q92902 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 MAPK10-379ENST00000642013 1385 ntBASIC12.96□□□□□ -0.33
HPS1Q92902 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.96□□□□□ -0.33
HPS1Q92902 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 REXO1L4P-201ENST00000605109 1937 ntBASIC12.96□□□□□ -0.33
HPS1Q92902 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.96□□□□□ -0.33
HPS1Q92902 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 FAM86MP-201ENST00000340703 885 ntBASIC12.96□□□□□ -0.33
HPS1Q92902 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HPS1Q92902 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 AC099336.1-201ENST00000417053 1171 ntBASIC12.96□□□□□ -0.33
HPS1Q92902 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.96□□□□□ -0.33
HPS1Q92902 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.96□□□□□ -0.33
HPS1Q92902 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
HPS1Q92902 YBX1P6-201ENST00000442962 1002 ntBASIC12.96□□□□□ -0.33
HPS1Q92902 AC093433.1-201ENST00000458048 571 ntBASIC12.96□□□□□ -0.33
HPS1Q92902 AC022137.2-201ENST00000503482 481 ntBASIC12.96□□□□□ -0.33
HPS1Q92902 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HPS1Q92902 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.96□□□□□ -0.33
HPS1Q92902 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HPS1Q92902 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.96□□□□□ -0.33
HPS1Q92902 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms