Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 AC055811.3-201ENST00000584952 686 ntBASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 COQ4-204ENST00000608951 781 ntTSL 2 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 AC015909.5-201ENST00000624336 2266 ntBASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.59□□□□□ -0.07
SHKBP1Q8TBC3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHKBP1Q8TBC3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHKBP1Q8TBC3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHKBP1Q8TBC3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
SHKBP1Q8TBC3 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
SHKBP1Q8TBC3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHKBP1Q8TBC3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.58□□□□□ -0.07
SHKBP1Q8TBC3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHKBP1Q8TBC3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
SHKBP1Q8TBC3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SHKBP1Q8TBC3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 AL365181.1-201ENST00000564032 1828 ntBASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 OR2W2P-201ENST00000406313 909 ntBASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 AL139008.1-201ENST00000437894 228 ntBASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 KRT18P62-201ENST00000446618 1287 ntBASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 RN7SL582P-201ENST00000491078 279 ntBASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 AC093300.1-201ENST00000510368 1201 ntBASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 HKR1-225ENST00000592168 566 ntTSL 4 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 AL049840.2-201ENST00000602722 535 ntBASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 AC008972.2-201ENST00000606587 494 ntBASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 MIR6746-201ENST00000620971 63 ntBASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHKBP1Q8TBC3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms