Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 FAM86MP-201ENST00000340703 885 ntBASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 AL160314.3-201ENST00000556041 767 ntBASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 MIR4538-201ENST00000581377 78 ntBASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 AC144522.1-201ENST00000625111 1658 ntBASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 AC018735.1-201ENST00000437208 1502 ntBASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 AC104073.2-201ENST00000453737 312 ntBASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 AC092658.1-201ENST00000505836 891 ntBASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 SCARNA21-201ENST00000517026 139 ntBASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CFAP61Q8NHU2 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC14.21□□□□□ -0.14
CFAP61Q8NHU2 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CFAP61Q8NHU2 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CFAP61Q8NHU2 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.21□□□□□ -0.14
CFAP61Q8NHU2 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CFAP61Q8NHU2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CFAP61Q8NHU2 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CFAP61Q8NHU2 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CFAP61Q8NHU2 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CFAP61Q8NHU2 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CFAP61Q8NHU2 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CFAP61Q8NHU2 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms