Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 SIRPB3P-201ENST00000340424 1216 ntBASIC21.24■□□□□ 0.99
VPS8Q8N3P4 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 PHBP10-201ENST00000416467 784 ntBASIC21.24■□□□□ 0.99
VPS8Q8N3P4 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 OS9-203ENST00000389142 2457 ntTSL 5 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 AC005154.3-201ENST00000419639 1393 ntBASIC21.24■□□□□ 0.99
VPS8Q8N3P4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 FTO-214ENST00000636218 2227 ntTSL 5 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
VPS8Q8N3P4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 HNRNPA1P33-201ENST00000421426 561 ntBASIC21.23■□□□□ 0.99
VPS8Q8N3P4 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 RPSAP12-201ENST00000435879 888 ntBASIC21.23■□□□□ 0.99
VPS8Q8N3P4 MTHFD2P7-201ENST00000483867 983 ntBASIC21.23■□□□□ 0.99
VPS8Q8N3P4 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 RNA5SP420-201ENST00000516997 137 ntBASIC21.23■□□□□ 0.99
VPS8Q8N3P4 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 AC010531.8-201ENST00000623341 685 ntBASIC21.23■□□□□ 0.99
VPS8Q8N3P4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS8Q8N3P4 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 COX20P1-201ENST00000366529 357 ntBASIC21.22■□□□□ 0.99
VPS8Q8N3P4 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 SEPHS2P1-201ENST00000511618 1162 ntBASIC21.22■□□□□ 0.99
VPS8Q8N3P4 APOC1-209ENST00000592885 562 ntTSL 3 BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 MFSD12-215ENST00000615613 688 ntBASIC21.22■□□□□ 0.99
VPS8Q8N3P4 DUX4L33-201ENST00000635217 958 ntBASIC21.22■□□□□ 0.99
VPS8Q8N3P4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC21.22■□□□□ 0.99
VPS8Q8N3P4 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS8Q8N3P4 AC011477.7-201ENST00000617163 1440 ntBASIC21.21■□□□□ 0.99
VPS8Q8N3P4 PTGER4P2-201ENST00000328411 252 ntBASIC21.21■□□□□ 0.99
VPS8Q8N3P4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms