Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 BAP1-211ENST00000615113 489 ntBASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 AC233280.19-201ENST00000633223 136 ntBASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 AL596257.1-201ENST00000641463 2694 ntBASIC13.47□□□□□ -0.25
LYSMD4Q5XG99 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 AL050341.2-201ENST00000567508 1541 ntBASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 FAU-201ENST00000279259 461 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 SNX15-201ENST00000352068 771 ntTSL 5 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 U73169.1-201ENST00000395152 367 ntBASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 SNRPCP15-201ENST00000424055 192 ntBASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 SNORA47-201ENST00000458862 138 ntBASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 SNRPD2P2-201ENST00000473818 333 ntBASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 AC233724.9-201ENST00000511694 407 ntBASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 AC009041.4-201ENST00000620075 638 ntBASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LYSMD4Q5XG99 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD4Q5XG99 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD4Q5XG99 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
LYSMD4Q5XG99 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD4Q5XG99 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD4Q5XG99 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD4Q5XG99 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.26
LYSMD4Q5XG99 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD4Q5XG99 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD4Q5XG99 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms