Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 AC073869.4-201ENST00000620841 800 ntBASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 AC023794.5-201ENST00000564380 2157 ntBASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 WASH7P-201ENST00000488147 1351 ntBASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 CCT8L1P-201ENST00000465400 1674 ntBASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 AC104961.1-201ENST00000427605 771 ntBASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 NRADDP-201ENST00000437305 691 ntBASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 AC100858.1-201ENST00000514059 1228 ntBASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 RN7SL556P-201ENST00000582856 298 ntBASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 TYMSP2-201ENST00000589501 424 ntBASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 CICP16-201ENST00000502609 2813 ntBASIC14.84□□□□□ -0.03
CTC1Q2NKJ3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.83□□□□□ -0.03
CTC1Q2NKJ3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CTC1Q2NKJ3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CTC1Q2NKJ3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CTC1Q2NKJ3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CTC1Q2NKJ3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
CTC1Q2NKJ3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CTC1Q2NKJ3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
CTC1Q2NKJ3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
CTC1Q2NKJ3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CTC1Q2NKJ3 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC14.83□□□□□ -0.03
CTC1Q2NKJ3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CTC1Q2NKJ3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 AC020658.7-201ENST00000624274 2442 ntBASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 AC073210.1-201ENST00000414799 232 ntBASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 AL161932.2-201ENST00000435436 679 ntBASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 HNRNPA1P16-201ENST00000575692 955 ntBASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 PHF23-213ENST00000613632 850 ntTSL 5 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms