Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC19.83■□□□□ 0.77
ATP7AQ04656 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
ATP7AQ04656 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC19.83■□□□□ 0.77
ATP7AQ04656 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP7AQ04656 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC19.83■□□□□ 0.76
ATP7AQ04656 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP7AQ04656 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP7AQ04656 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP7AQ04656 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP7AQ04656 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
ATP7AQ04656 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP7AQ04656 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP7AQ04656 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
ATP7AQ04656 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP7AQ04656 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP7AQ04656 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 ZNF493-208ENST00000599461 1769 ntBASIC19.82■□□□□ 0.76
ATP7AQ04656 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ATP7AQ04656 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ATP7AQ04656 HNRNPA1P33-201ENST00000421426 561 ntBASIC19.82■□□□□ 0.76
ATP7AQ04656 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC19.82■□□□□ 0.76
ATP7AQ04656 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC19.82■□□□□ 0.76
ATP7AQ04656 AC069421.1-201ENST00000447462 323 ntBASIC19.82■□□□□ 0.76
ATP7AQ04656 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC19.82■□□□□ 0.76
ATP7AQ04656 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 RN7SL477P-201ENST00000488440 286 ntBASIC19.82■□□□□ 0.76
ATP7AQ04656 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP7AQ04656 NEMF-210ENST00000556672 590 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP7AQ04656 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 MIR4309-201ENST00000582498 83 ntBASIC19.82■□□□□ 0.76
ATP7AQ04656 MIR5193-201ENST00000584510 109 ntBASIC19.82■□□□□ 0.76
ATP7AQ04656 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC19.82■□□□□ 0.76
ATP7AQ04656 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
ATP7AQ04656 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ATP7AQ04656 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP7AQ04656 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ATP7AQ04656 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ATP7AQ04656 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP7AQ04656 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ATP7AQ04656 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP7AQ04656 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ATP7AQ04656 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP7AQ04656 AC018868.2-201ENST00000559655 1259 ntBASIC19.81■□□□□ 0.76
ATP7AQ04656 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP7AQ04656 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ATP7AQ04656 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP7AQ04656 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ATP7AQ04656 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
ATP7AQ04656 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC19.81■□□□□ 0.76
ATP7AQ04656 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP7AQ04656 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ATP7AQ04656 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP7AQ04656 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP7AQ04656 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP7AQ04656 PLAC9P1-203ENST00000440031 223 ntBASIC19.81■□□□□ 0.76
ATP7AQ04656 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP7AQ04656 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP7AQ04656 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ATP7AQ04656 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP7AQ04656 AL589743.3-201ENST00000604121 517 ntBASIC19.81■□□□□ 0.76
ATP7AQ04656 AC009779.7-201ENST00000609031 469 ntBASIC19.81■□□□□ 0.76
ATP7AQ04656 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
ATP7AQ04656 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ATP7AQ04656 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC19.81■□□□□ 0.76
ATP7AQ04656 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP7AQ04656 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP7AQ04656 Z98259.1-201ENST00000564261 1697 ntBASIC19.81■□□□□ 0.76
ATP7AQ04656 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ATP7AQ04656 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP7AQ04656 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms