Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TPM4P67936 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TPM4P67936 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.68■□□□□ 0.1
TPM4P67936 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TPM4P67936 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 AC016694.1-201ENST00000434179 700 ntBASIC15.68■□□□□ 0.1
TPM4P67936 CHMP1AP1-201ENST00000445563 662 ntBASIC15.68■□□□□ 0.1
TPM4P67936 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.68■□□□□ 0.1
TPM4P67936 AC078819.1-201ENST00000547454 765 ntBASIC15.68■□□□□ 0.1
TPM4P67936 AC012085.1-201ENST00000548270 765 ntBASIC15.68■□□□□ 0.1
TPM4P67936 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.68■□□□□ 0.1
TPM4P67936 TP53TG3HP-202ENST00000569755 579 ntBASIC15.68■□□□□ 0.1
TPM4P67936 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.68■□□□□ 0.1
TPM4P67936 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TPM4P67936 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
TPM4P67936 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC15.68■□□□□ 0.1
TPM4P67936 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TPM4P67936 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM4P67936 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM4P67936 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TPM4P67936 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TPM4P67936 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC15.67■□□□□ 0.1
TPM4P67936 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM4P67936 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TPM4P67936 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM4P67936 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
TPM4P67936 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM4P67936 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC15.67■□□□□ 0.1
TPM4P67936 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TPM4P67936 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM4P67936 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.67■□□□□ 0.1
TPM4P67936 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM4P67936 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.67■□□□□ 0.1
TPM4P67936 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TPM4P67936 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.67■□□□□ 0.1
TPM4P67936 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
TPM4P67936 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.67■□□□□ 0.1
TPM4P67936 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.67■□□□□ 0.1
TPM4P67936 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.67■□□□□ 0.1
TPM4P67936 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.67■□□□□ 0.1
TPM4P67936 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TPM4P67936 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.67■□□□□ 0.1
TPM4P67936 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.67■□□□□ 0.1
TPM4P67936 AL022328.1-201ENST00000610050 478 ntBASIC15.67■□□□□ 0.1
TPM4P67936 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM4P67936 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM4P67936 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC15.67■□□□□ 0.1
TPM4P67936 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM4P67936 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TPM4P67936 CICP1-201ENST00000416803 2410 ntBASIC15.67■□□□□ 0.1
TPM4P67936 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM4P67936 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC15.67■□□□□ 0.1
TPM4P67936 LINC00115-201ENST00000473798 1317 ntBASIC15.67■□□□□ 0.1
TPM4P67936 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TPM4P67936 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
TPM4P67936 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TPM4P67936 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC15.66■□□□□ 0.1
TPM4P67936 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TPM4P67936 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.66■□□□□ 0.1
TPM4P67936 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TPM4P67936 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TPM4P67936 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC15.66■□□□□ 0.1
TPM4P67936 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TPM4P67936 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 AC092933.1-201ENST00000393644 945 ntBASIC15.66■□□□□ 0.1
TPM4P67936 DGCR5-201ENST00000399539 862 ntBASIC15.66■□□□□ 0.1
TPM4P67936 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 AP006294.1-201ENST00000415407 339 ntBASIC15.66■□□□□ 0.1
TPM4P67936 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.66■□□□□ 0.1
TPM4P67936 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.66■□□□□ 0.1
TPM4P67936 BCRP2-202ENST00000447763 634 ntBASIC15.66■□□□□ 0.1
TPM4P67936 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TPM4P67936 BCRP6-201ENST00000510112 632 ntBASIC15.66■□□□□ 0.1
TPM4P67936 BCRP7-201ENST00000511549 544 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms