Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC024075.2-201ENST00000598112 1473 ntBASIC15.22■□□□□ 0.03
CPT1AP50416 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CPT1AP50416 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 AL513497.1-201ENST00000624273 2083 ntBASIC15.22■□□□□ 0.03
CPT1AP50416 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CPT1AP50416 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC15.22■□□□□ 0.03
CPT1AP50416 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CPT1AP50416 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC15.22■□□□□ 0.03
CPT1AP50416 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC15.22■□□□□ 0.03
CPT1AP50416 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC15.22■□□□□ 0.03
CPT1AP50416 SOD2-205ENST00000444946 917 ntTSL 2 BASIC15.22■□□□□ 0.03
CPT1AP50416 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC15.22■□□□□ 0.03
CPT1AP50416 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC15.22■□□□□ 0.03
CPT1AP50416 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC15.22■□□□□ 0.03
CPT1AP50416 EMC4-208ENST00000559078 599 ntTSL 3 BASIC15.22■□□□□ 0.03
CPT1AP50416 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC15.22■□□□□ 0.03
CPT1AP50416 RN7SL524P-201ENST00000581152 300 ntBASIC15.22■□□□□ 0.03
CPT1AP50416 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC15.22■□□□□ 0.03
CPT1AP50416 PRMT1P1-201ENST00000604252 1009 ntBASIC15.22■□□□□ 0.03
CPT1AP50416 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.22■□□□□ 0.03
CPT1AP50416 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CPT1AP50416 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC15.22■□□□□ 0.03
CPT1AP50416 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 AL928654.5-201ENST00000624831 2501 ntBASIC15.22■□□□□ 0.03
CPT1AP50416 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CPT1AP50416 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CPT1AP50416 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC15.22■□□□□ 0.03
CPT1AP50416 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.22■□□□□ 0.03
CPT1AP50416 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC15.22■□□□□ 0.03
CPT1AP50416 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPT1AP50416 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.22■□□□□ 0.03
CPT1AP50416 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CPT1AP50416 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CPT1AP50416 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC15.21■□□□□ 0.03
CPT1AP50416 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CPT1AP50416 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CPT1AP50416 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CPT1AP50416 AC008536.3-201ENST00000623282 1599 ntBASIC15.21■□□□□ 0.03
CPT1AP50416 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CPT1AP50416 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC15.21■□□□□ 0.03
CPT1AP50416 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CPT1AP50416 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC15.21■□□□□ 0.03
CPT1AP50416 EEF1DP5-201ENST00000431410 772 ntBASIC15.21■□□□□ 0.03
CPT1AP50416 KRT8P30-201ENST00000432100 650 ntBASIC15.21■□□□□ 0.03
CPT1AP50416 CCND3P1-201ENST00000438347 580 ntBASIC15.21■□□□□ 0.03
CPT1AP50416 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 HNRNPA3P6-201ENST00000472163 1006 ntBASIC15.21■□□□□ 0.03
CPT1AP50416 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CPT1AP50416 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC15.21■□□□□ 0.03
CPT1AP50416 IGHVII-74-1-201ENST00000517572 241 ntBASIC15.21■□□□□ 0.03
CPT1AP50416 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC15.21■□□□□ 0.03
CPT1AP50416 SAA2-206ENST00000530400 323 ntTSL 3 BASIC15.21■□□□□ 0.03
CPT1AP50416 BMF-206ENST00000558774 671 ntTSL 3 BASIC15.21■□□□□ 0.03
CPT1AP50416 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC15.21■□□□□ 0.03
CPT1AP50416 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC15.21■□□□□ 0.03
CPT1AP50416 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CPT1AP50416 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CPT1AP50416 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPT1AP50416 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CPT1AP50416 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CPT1AP50416 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.21■□□□□ 0.02
CPT1AP50416 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CPT1AP50416 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CPT1AP50416 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CPT1AP50416 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.21■□□□□ 0.02
CPT1AP50416 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.2■□□□□ 0.02
CPT1AP50416 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPT1AP50416 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPT1AP50416 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPT1AP50416 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.2■□□□□ 0.02
CPT1AP50416 KRT8P38-201ENST00000441370 1430 ntBASIC15.2■□□□□ 0.02
CPT1AP50416 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.2■□□□□ 0.02
CPT1AP50416 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPT1AP50416 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPT1AP50416 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPT1AP50416 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CPT1AP50416 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms