Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.19■□□□□ 0.02
PSEN1P49768 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC15.19■□□□□ 0.02
PSEN1P49768 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PSEN1P49768 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.19■□□□□ 0.02
PSEN1P49768 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PSEN1P49768 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 SLC25A24P2-201ENST00000415059 510 ntBASIC15.19■□□□□ 0.02
PSEN1P49768 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC15.19■□□□□ 0.02
PSEN1P49768 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.19■□□□□ 0.02
PSEN1P49768 LAMTOR5-AS1-202ENST00000457535 817 ntTSL 3 BASIC15.19■□□□□ 0.02
PSEN1P49768 RN7SL11P-201ENST00000471305 293 ntBASIC15.19■□□□□ 0.02
PSEN1P49768 AC090857.1-201ENST00000527400 390 ntBASIC15.19■□□□□ 0.02
PSEN1P49768 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC15.19■□□□□ 0.02
PSEN1P49768 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.19■□□□□ 0.02
PSEN1P49768 MIR3188-201ENST00000583494 85 ntBASIC15.19■□□□□ 0.02
PSEN1P49768 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC15.19■□□□□ 0.02
PSEN1P49768 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.19■□□□□ 0.02
PSEN1P49768 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PSEN1P49768 AC242988.1-201ENST00000611044 714 ntTSL 3 BASIC15.19■□□□□ 0.02
PSEN1P49768 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.19■□□□□ 0.02
PSEN1P49768 AC022306.2-201ENST00000617563 647 ntBASIC15.19■□□□□ 0.02
PSEN1P49768 AC138627.1-207ENST00000641560 1006 ntBASIC15.19■□□□□ 0.02
PSEN1P49768 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.19■□□□□ 0.02
PSEN1P49768 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.19■□□□□ 0.02
PSEN1P49768 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
PSEN1P49768 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC15.19■□□□□ 0.02
PSEN1P49768 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 VENTXP1-201ENST00000569334 2716 ntBASIC15.19■□□□□ 0.02
PSEN1P49768 KRT8P21-201ENST00000430398 1491 ntBASIC15.19■□□□□ 0.02
PSEN1P49768 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.19■□□□□ 0.02
PSEN1P49768 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PSEN1P49768 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PSEN1P49768 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.19■□□□□ 0.02
PSEN1P49768 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PSEN1P49768 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PSEN1P49768 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.19■□□□□ 0.02
PSEN1P49768 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PSEN1P49768 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC15.19■□□□□ 0.02
PSEN1P49768 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSEN1P49768 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.18■□□□□ 0.02
PSEN1P49768 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.18■□□□□ 0.02
PSEN1P49768 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PSEN1P49768 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.18■□□□□ 0.02
PSEN1P49768 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PSEN1P49768 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
PSEN1P49768 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.18■□□□□ 0.02
PSEN1P49768 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.18■□□□□ 0.02
PSEN1P49768 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.18■□□□□ 0.02
PSEN1P49768 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
PSEN1P49768 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PSEN1P49768 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PSEN1P49768 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
PSEN1P49768 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PSEN1P49768 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSEN1P49768 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
PSEN1P49768 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC15.18■□□□□ 0.02
PSEN1P49768 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSEN1P49768 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PSEN1P49768 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PSEN1P49768 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PSEN1P49768 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC15.18■□□□□ 0.02
PSEN1P49768 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PSEN1P49768 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.18■□□□□ 0.02
PSEN1P49768 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PSEN1P49768 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.18■□□□□ 0.02
PSEN1P49768 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PSEN1P49768 AL365338.1-201ENST00000422282 858 ntBASIC15.18■□□□□ 0.02
PSEN1P49768 USP9YP14-201ENST00000430663 563 ntBASIC15.18■□□□□ 0.02
PSEN1P49768 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSEN1P49768 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.18■□□□□ 0.02
PSEN1P49768 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC15.18■□□□□ 0.02
PSEN1P49768 OR4A18P-201ENST00000529103 1088 ntBASIC15.18■□□□□ 0.02
PSEN1P49768 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.18■□□□□ 0.02
PSEN1P49768 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC15.18■□□□□ 0.02
PSEN1P49768 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC15.18■□□□□ 0.02
PSEN1P49768 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PSEN1P49768 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PSEN1P49768 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.18■□□□□ 0.02
PSEN1P49768 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms