Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CLK1P49759 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CLK1P49759 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.21□□□□□ -0.29
CLK1P49759 AL118505.1-201ENST00000619370 1932 ntBASIC13.21□□□□□ -0.29
CLK1P49759 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
CLK1P49759 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CLK1P49759 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
CLK1P49759 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CLK1P49759 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.21□□□□□ -0.29
CLK1P49759 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.21□□□□□ -0.29
CLK1P49759 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.21□□□□□ -0.29
CLK1P49759 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.21□□□□□ -0.29
CLK1P49759 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.21□□□□□ -0.29
CLK1P49759 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.21□□□□□ -0.29
CLK1P49759 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CLK1P49759 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.21□□□□□ -0.29
CLK1P49759 AC005586.2-201ENST00000563946 837 ntBASIC13.21□□□□□ -0.29
CLK1P49759 MIR4259-201ENST00000584466 101 ntBASIC13.21□□□□□ -0.29
CLK1P49759 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CLK1P49759 AC009884.2-201ENST00000603110 324 ntBASIC13.21□□□□□ -0.29
CLK1P49759 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.21□□□□□ -0.29
CLK1P49759 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLK1P49759 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
CLK1P49759 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLK1P49759 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLK1P49759 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CLK1P49759 AC131902.2-201ENST00000566892 2172 ntBASIC13.21□□□□□ -0.3
CLK1P49759 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
CLK1P49759 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CLK1P49759 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLK1P49759 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.21□□□□□ -0.3
CLK1P49759 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.21□□□□□ -0.3
CLK1P49759 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLK1P49759 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLK1P49759 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLK1P49759 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLK1P49759 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLK1P49759 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.2□□□□□ -0.3
CLK1P49759 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.2□□□□□ -0.3
CLK1P49759 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.2□□□□□ -0.3
CLK1P49759 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC13.2□□□□□ -0.3
CLK1P49759 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLK1P49759 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLK1P49759 TUBB1P2-201ENST00000422712 1306 ntBASIC13.2□□□□□ -0.3
CLK1P49759 TUBB1P1-201ENST00000503144 1300 ntBASIC13.2□□□□□ -0.3
CLK1P49759 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CLK1P49759 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.2□□□□□ -0.3
CLK1P49759 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.2□□□□□ -0.3
CLK1P49759 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.2□□□□□ -0.3
CLK1P49759 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.2□□□□□ -0.3
CLK1P49759 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.2□□□□□ -0.3
CLK1P49759 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.2□□□□□ -0.3
CLK1P49759 AC100827.2-201ENST00000563214 1194 ntBASIC13.2□□□□□ -0.3
CLK1P49759 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.2□□□□□ -0.3
CLK1P49759 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.2□□□□□ -0.3
CLK1P49759 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.2□□□□□ -0.3
CLK1P49759 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.2□□□□□ -0.3
CLK1P49759 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 AL023803.2-201ENST00000620080 638 ntBASIC13.2□□□□□ -0.3
CLK1P49759 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 DNM1P41-201ENST00000623634 3350 ntBASIC13.2□□□□□ -0.3
CLK1P49759 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms