Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
ATRXP46100 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
ATRXP46100 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC12.53□□□□□ -0.4
ATRXP46100 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC12.53□□□□□ -0.4
ATRXP46100 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC12.53□□□□□ -0.4
ATRXP46100 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC12.53□□□□□ -0.4
ATRXP46100 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC12.53□□□□□ -0.4
ATRXP46100 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC12.53□□□□□ -0.4
ATRXP46100 AC016735.1-201ENST00000457457 237 ntTSL 2 BASIC12.53□□□□□ -0.4
ATRXP46100 AC079944.2-201ENST00000478867 734 ntBASIC12.53□□□□□ -0.4
ATRXP46100 AC098591.1-202ENST00000507914 937 ntBASIC12.53□□□□□ -0.4
ATRXP46100 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.53□□□□□ -0.4
ATRXP46100 MPHOSPH6-203ENST00000563504 617 ntTSL 2 BASIC12.53□□□□□ -0.4
ATRXP46100 MED11-203ENST00000575284 652 ntTSL 3 BASIC12.53□□□□□ -0.4
ATRXP46100 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 AC138035.3-201ENST00000622706 2791 ntBASIC12.53□□□□□ -0.4
ATRXP46100 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.53□□□□□ -0.4
ATRXP46100 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC12.53□□□□□ -0.4
ATRXP46100 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
ATRXP46100 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.53□□□□□ -0.4
ATRXP46100 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.53□□□□□ -0.4
ATRXP46100 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
ATRXP46100 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 AL356583.3-201ENST00000412354 417 ntBASIC12.53□□□□□ -0.4
ATRXP46100 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.53□□□□□ -0.4
ATRXP46100 AP001775.1-201ENST00000532608 586 ntBASIC12.53□□□□□ -0.4
ATRXP46100 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ATRXP46100 AC005586.2-201ENST00000563946 837 ntBASIC12.53□□□□□ -0.4
ATRXP46100 SNX20-205ENST00000610485 557 ntTSL 5 BASIC12.53□□□□□ -0.4
ATRXP46100 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ATRXP46100 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
ATRXP46100 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC12.53□□□□□ -0.4
ATRXP46100 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.53□□□□□ -0.4
ATRXP46100 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATRXP46100 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ATRXP46100 SALL4P6-201ENST00000429385 1691 ntBASIC12.52□□□□□ -0.4
ATRXP46100 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.52□□□□□ -0.4
ATRXP46100 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ATRXP46100 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ATRXP46100 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
ATRXP46100 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
ATRXP46100 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ATRXP46100 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
ATRXP46100 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ATRXP46100 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
ATRXP46100 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC12.52□□□□□ -0.4
ATRXP46100 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ATRXP46100 KRT18P42-201ENST00000505048 1255 ntBASIC12.52□□□□□ -0.4
ATRXP46100 FAM173B-207ENST00000511437 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
ATRXP46100 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.52□□□□□ -0.4
ATRXP46100 DDX11L8-201ENST00000535849 366 ntBASIC12.52□□□□□ -0.4
ATRXP46100 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC12.52□□□□□ -0.4
ATRXP46100 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.52□□□□□ -0.4
ATRXP46100 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
ATRXP46100 MIR6880-201ENST00000622851 62 ntBASIC12.52□□□□□ -0.4
ATRXP46100 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ATRXP46100 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ATRXP46100 AL365203.3-201ENST00000609742 2057 ntBASIC12.52□□□□□ -0.4
ATRXP46100 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ATRXP46100 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
ATRXP46100 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATRXP46100 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
ATRXP46100 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATRXP46100 AL845472.1-202ENST00000624675 4080 ntBASIC12.52□□□□□ -0.41
ATRXP46100 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATRXP46100 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ATRXP46100 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms