Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTTP42858 INTS4P1-203ENST00000641008 3683 ntBASIC14.91□□□□□ -0.02
HTTP42858 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC14.9□□□□□ -0.02
HTTP42858 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
HTTP42858 AL137028.1-201ENST00000620521 555 ntBASIC14.9□□□□□ -0.02
HTTP42858 UBA3-212ENST00000630585 390 ntTSL 4 BASIC14.9□□□□□ -0.02
HTTP42858 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.9□□□□□ -0.02
HTTP42858 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
HTTP42858 AL513497.1-201ENST00000624273 2083 ntBASIC14.9□□□□□ -0.02
HTTP42858 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.9□□□□□ -0.02
HTTP42858 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC14.9□□□□□ -0.02
HTTP42858 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC14.9□□□□□ -0.02
HTTP42858 MTND6P7-201ENST00000433237 524 ntBASIC14.9□□□□□ -0.02
HTTP42858 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC14.9□□□□□ -0.02
HTTP42858 RPL18P1-201ENST00000497218 552 ntBASIC14.9□□□□□ -0.02
HTTP42858 GAPDHP76-201ENST00000512278 976 ntBASIC14.9□□□□□ -0.02
HTTP42858 AC007992.1-201ENST00000513953 953 ntBASIC14.9□□□□□ -0.02
HTTP42858 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC14.9□□□□□ -0.02
HTTP42858 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC14.9□□□□□ -0.02
HTTP42858 IGHV1OR16-3-201ENST00000568138 205 ntBASIC14.9□□□□□ -0.02
HTTP42858 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.9□□□□□ -0.02
HTTP42858 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HTTP42858 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 CYP2B7P-201ENST00000541697 1476 ntBASIC14.9□□□□□ -0.02
HTTP42858 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
HTTP42858 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.9□□□□□ -0.02
HTTP42858 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
HTTP42858 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC14.9□□□□□ -0.02
HTTP42858 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC14.9□□□□□ -0.02
HTTP42858 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC14.9□□□□□ -0.02
HTTP42858 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC14.9□□□□□ -0.02
HTTP42858 AC244102.2-201ENST00000597568 955 ntBASIC14.9□□□□□ -0.02
HTTP42858 AP006621.5-202ENST00000623692 636 ntBASIC14.9□□□□□ -0.02
HTTP42858 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTTP42858 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTTP42858 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTTP42858 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTTP42858 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HTTP42858 LINC02228-204ENST00000642115 2962 ntBASIC14.89□□□□□ -0.03
HTTP42858 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTTP42858 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HTTP42858 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HTTP42858 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HTTP42858 HLA-DQB3-203ENST00000425319 356 ntBASIC14.89□□□□□ -0.03
HTTP42858 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC14.89□□□□□ -0.03
HTTP42858 TSACC-206ENST00000466306 477 ntTSL 3 BASIC14.89□□□□□ -0.03
HTTP42858 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
HTTP42858 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.89□□□□□ -0.03
HTTP42858 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTTP42858 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HTTP42858 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.89□□□□□ -0.03
HTTP42858 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTTP42858 PCDHB19P-202ENST00000625133 2914 ntBASIC14.89□□□□□ -0.03
HTTP42858 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTTP42858 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTTP42858 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
HTTP42858 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HTTP42858 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HTTP42858 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.89□□□□□ -0.03
HTTP42858 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTTP42858 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTTP42858 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HTTP42858 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HTTP42858 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC14.89□□□□□ -0.03
HTTP42858 AC009238.3-201ENST00000512705 217 ntBASIC14.89□□□□□ -0.03
HTTP42858 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
HTTP42858 AL512631.1-201ENST00000604086 840 ntBASIC14.89□□□□□ -0.03
HTTP42858 PIGA-209ENST00000634582 965 ntTSL 2 BASIC14.89□□□□□ -0.03
HTTP42858 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC14.89□□□□□ -0.03
HTTP42858 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.89□□□□□ -0.03
HTTP42858 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTTP42858 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC14.89□□□□□ -0.03
HTTP42858 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTTP42858 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTTP42858 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.89□□□□□ -0.03
HTTP42858 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTTP42858 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HTTP42858 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTTP42858 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTTP42858 MESTP4-201ENST00000412333 1204 ntBASIC14.88□□□□□ -0.03
HTTP42858 MAS1LP1-206ENST00000419416 1047 ntBASIC14.88□□□□□ -0.03
HTTP42858 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.88□□□□□ -0.03
HTTP42858 MYL6-210ENST00000548400 573 ntTSL 3 BASIC14.88□□□□□ -0.03
HTTP42858 AZU1P1-201ENST00000603479 385 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms