Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
USP8P40818 AL033527.4-201ENST00000641026 673 ntBASIC15.29■□□□□ 0.04
USP8P40818 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC15.29■□□□□ 0.04
USP8P40818 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP8P40818 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP8P40818 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP8P40818 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP8P40818 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP8P40818 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC15.29■□□□□ 0.04
USP8P40818 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP8P40818 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP8P40818 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP8P40818 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP8P40818 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP8P40818 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP8P40818 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP8P40818 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.28■□□□□ 0.04
USP8P40818 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC15.28■□□□□ 0.04
USP8P40818 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.28■□□□□ 0.04
USP8P40818 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 PTPRVP-205ENST00000641549 5067 ntBASIC15.28■□□□□ 0.04
USP8P40818 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.28■□□□□ 0.04
USP8P40818 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.28■□□□□ 0.04
USP8P40818 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.28■□□□□ 0.04
USP8P40818 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.28■□□□□ 0.04
USP8P40818 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
USP8P40818 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.28■□□□□ 0.04
USP8P40818 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 AC044849.1-201ENST00000519737 1188 ntBASIC15.28■□□□□ 0.04
USP8P40818 AC126915.1-201ENST00000522847 1038 ntBASIC15.28■□□□□ 0.04
USP8P40818 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.28■□□□□ 0.04
USP8P40818 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.28■□□□□ 0.04
USP8P40818 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.28■□□□□ 0.04
USP8P40818 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.28■□□□□ 0.04
USP8P40818 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.28■□□□□ 0.04
USP8P40818 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 AL118558.3-201ENST00000607414 1079 ntBASIC15.28■□□□□ 0.04
USP8P40818 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
USP8P40818 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.28■□□□□ 0.04
USP8P40818 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.28■□□□□ 0.04
USP8P40818 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.28■□□□□ 0.04
USP8P40818 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
USP8P40818 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP8P40818 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP8P40818 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC15.27■□□□□ 0.04
USP8P40818 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USP8P40818 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USP8P40818 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.27■□□□□ 0.04
USP8P40818 TSN-212ENST00000536142 3328 ntTSL 2 BASIC15.27■□□□□ 0.04
USP8P40818 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP8P40818 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USP8P40818 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
USP8P40818 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP8P40818 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP8P40818 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
USP8P40818 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.27■□□□□ 0.04
USP8P40818 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
USP8P40818 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.27■□□□□ 0.04
USP8P40818 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP8P40818 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.27■□□□□ 0.04
USP8P40818 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.27■□□□□ 0.04
USP8P40818 AC103592.1-201ENST00000394513 664 ntBASIC15.27■□□□□ 0.04
USP8P40818 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP8P40818 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.27■□□□□ 0.04
USP8P40818 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.27■□□□□ 0.04
USP8P40818 PFN1P12-201ENST00000455938 534 ntBASIC15.27■□□□□ 0.04
USP8P40818 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
USP8P40818 RN7SL277P-201ENST00000481521 288 ntBASIC15.27■□□□□ 0.04
USP8P40818 AC009779.1-201ENST00000551138 283 ntBASIC15.27■□□□□ 0.04
USP8P40818 AC013355.1-201ENST00000562625 723 ntBASIC15.27■□□□□ 0.04
USP8P40818 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USP8P40818 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.27■□□□□ 0.04
USP8P40818 AL008638.5-201ENST00000623814 1298 ntBASIC15.27■□□□□ 0.04
USP8P40818 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP8P40818 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.27■□□□□ 0.03
USP8P40818 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP8P40818 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
USP8P40818 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP8P40818 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP8P40818 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
USP8P40818 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.27■□□□□ 0.03
USP8P40818 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP8P40818 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP8P40818 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms