Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CHRNA3P32297 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA3P32297 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
CHRNA3P32297 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA3P32297 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CHRNA3P32297 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CHRNA3P32297 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.72□□□□□ -0.05
CHRNA3P32297 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNA3P32297 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNA3P32297 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNA3P32297 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA3P32297 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNA3P32297 AC012618.1-201ENST00000461223 412 ntBASIC14.72□□□□□ -0.05
CHRNA3P32297 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNA3P32297 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA3P32297 AC245884.6-201ENST00000515672 1067 ntBASIC14.72□□□□□ -0.05
CHRNA3P32297 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA3P32297 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNA3P32297 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA3P32297 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
CHRNA3P32297 AC091812.3-201ENST00000621362 345 ntBASIC14.72□□□□□ -0.05
CHRNA3P32297 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA3P32297 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNA3P32297 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CHRNA3P32297 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CHRNA3P32297 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CHRNA3P32297 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNA3P32297 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CHRNA3P32297 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CHRNA3P32297 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA3P32297 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNA3P32297 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CHRNA3P32297 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CHRNA3P32297 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHRNA3P32297 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNA3P32297 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.71□□□□□ -0.05
CHRNA3P32297 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNA3P32297 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
CHRNA3P32297 KRT8P21-201ENST00000430398 1491 ntBASIC14.71□□□□□ -0.05
CHRNA3P32297 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CHRNA3P32297 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
CHRNA3P32297 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CHRNA3P32297 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CHRNA3P32297 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 KRT18P36-201ENST00000411618 1276 ntBASIC14.71□□□□□ -0.05
CHRNA3P32297 XBP1P1-201ENST00000436573 652 ntBASIC14.71□□□□□ -0.05
CHRNA3P32297 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNA3P32297 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNA3P32297 AL596276.2-201ENST00000447525 331 ntBASIC14.71□□□□□ -0.05
CHRNA3P32297 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CHRNA3P32297 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.71□□□□□ -0.05
CHRNA3P32297 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.71□□□□□ -0.05
CHRNA3P32297 CHMP4BP1-201ENST00000556017 588 ntBASIC14.71□□□□□ -0.05
CHRNA3P32297 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNA3P32297 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNA3P32297 AC097724.1-201ENST00000609581 426 ntBASIC14.71□□□□□ -0.05
CHRNA3P32297 AL157813.1-201ENST00000612996 587 ntBASIC14.71□□□□□ -0.05
CHRNA3P32297 AC092299.1-201ENST00000632679 757 ntBASIC14.71□□□□□ -0.05
CHRNA3P32297 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CHRNA3P32297 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNA3P32297 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHRNA3P32297 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHRNA3P32297 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHRNA3P32297 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 AC018629.1-201ENST00000623381 1736 ntBASIC14.71□□□□□ -0.05
CHRNA3P32297 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms