Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC10.72□□□□□ -0.69
RAB4AP20338 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC10.72□□□□□ -0.69
RAB4AP20338 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 TTC8-205ENST00000358622 2297 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB4AP20338 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 NGRN-202ENST00000379095 7237 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
RAB4AP20338 ANKRD36-201ENST00000420699 6269 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
RAB4AP20338 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RAB4AP20338 MCCD1P2-201ENST00000423228 335 ntBASIC10.72□□□□□ -0.69
RAB4AP20338 SPDYE14P-201ENST00000442619 822 ntBASIC10.72□□□□□ -0.69
RAB4AP20338 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
RAB4AP20338 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC10.72□□□□□ -0.69
RAB4AP20338 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC10.72□□□□□ -0.69
RAB4AP20338 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB4AP20338 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC10.72□□□□□ -0.69
RAB4AP20338 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RAB4AP20338 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.72□□□□□ -0.69
RAB4AP20338 AC022145.2-201ENST00000598203 171 ntBASIC10.72□□□□□ -0.69
RAB4AP20338 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC10.72□□□□□ -0.69
RAB4AP20338 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 C20orf181-201ENST00000623918 480 ntBASIC10.72□□□□□ -0.69
RAB4AP20338 AC105339.1-204ENST00000636249 355 ntBASIC10.72□□□□□ -0.69
RAB4AP20338 FCRL2-201ENST00000361516 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RAB4AP20338 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 MRPL37P1-201ENST00000592451 1337 ntBASIC10.72□□□□□ -0.69
RAB4AP20338 PES1-205ENST00000405677 2708 ntTSL 2 BASIC10.72□□□□□ -0.69
RAB4AP20338 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
RAB4AP20338 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
RAB4AP20338 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
RAB4AP20338 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
RAB4AP20338 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
RAB4AP20338 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.72□□□□□ -0.69
RAB4AP20338 IGSF3-202ENST00000369483 7326 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
RAB4AP20338 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 LINC02362-203ENST00000617323 2044 ntTSL 2 BASIC10.72□□□□□ -0.69
RAB4AP20338 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 DCT-202ENST00000446125 2395 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 DBIL5P-203ENST00000536214 2677 ntBASIC10.71□□□□□ -0.69
RAB4AP20338 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB4AP20338 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
RAB4AP20338 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB4AP20338 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
RAB4AP20338 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
RAB4AP20338 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 OTOG-201ENST00000342528 4992 ntTSL 2 BASIC10.71□□□□□ -0.69
RAB4AP20338 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC10.71□□□□□ -0.69
RAB4AP20338 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
RAB4AP20338 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
RAB4AP20338 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 ACBD5-203ENST00000375901 3685 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
RAB4AP20338 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 MPV17-208ENST00000405076 603 ntTSL 5 BASIC10.71□□□□□ -0.69
RAB4AP20338 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.71□□□□□ -0.69
RAB4AP20338 RPL37AP1-201ENST00000412502 279 ntBASIC10.71□□□□□ -0.69
RAB4AP20338 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.71□□□□□ -0.69
RAB4AP20338 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
RAB4AP20338 AC004832.2-201ENST00000426397 482 ntBASIC10.71□□□□□ -0.69
RAB4AP20338 GPS2P2-201ENST00000430745 888 ntBASIC10.71□□□□□ -0.69
RAB4AP20338 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 AC007969.1-201ENST00000433675 447 ntBASIC10.71□□□□□ -0.69
RAB4AP20338 MKNK2P1-201ENST00000437526 628 ntBASIC10.71□□□□□ -0.69
RAB4AP20338 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RAB4AP20338 LINC01165-201ENST00000445190 1623 ntBASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms