Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
ATF3P18847 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC18.65■□□□□ 0.58
ATF3P18847 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC18.65■□□□□ 0.58
ATF3P18847 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC18.65■□□□□ 0.58
ATF3P18847 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATF3P18847 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF3P18847 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF3P18847 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATF3P18847 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC18.65■□□□□ 0.58
ATF3P18847 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC18.65■□□□□ 0.58
ATF3P18847 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATF3P18847 STK25-235ENST00000543554 2556 ntTSL 2 BASIC18.65■□□□□ 0.58
ATF3P18847 LINC02486-201ENST00000604157 3000 ntBASIC18.65■□□□□ 0.58
ATF3P18847 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC18.65■□□□□ 0.58
ATF3P18847 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATF3P18847 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATF3P18847 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATF3P18847 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ATF3P18847 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ATF3P18847 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.64■□□□□ 0.57
ATF3P18847 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.64■□□□□ 0.57
ATF3P18847 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.64■□□□□ 0.57
ATF3P18847 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATF3P18847 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 RPS6-201ENST00000315377 863 ntTSL 3 BASIC18.64■□□□□ 0.57
ATF3P18847 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ATF3P18847 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 FTLP3-201ENST00000427242 528 ntBASIC18.64■□□□□ 0.57
ATF3P18847 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC18.64■□□□□ 0.57
ATF3P18847 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC18.64■□□□□ 0.57
ATF3P18847 BICD1P1-201ENST00000457832 1222 ntBASIC18.64■□□□□ 0.57
ATF3P18847 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC18.64■□□□□ 0.57
ATF3P18847 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC18.64■□□□□ 0.57
ATF3P18847 AL137028.2-201ENST00000614601 256 ntBASIC18.64■□□□□ 0.57
ATF3P18847 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.64■□□□□ 0.57
ATF3P18847 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ATF3P18847 AC012358.2-201ENST00000430010 1434 ntBASIC18.64■□□□□ 0.57
ATF3P18847 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF3P18847 AC020763.3-201ENST00000625095 2904 ntBASIC18.63■□□□□ 0.57
ATF3P18847 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ATF3P18847 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC18.63■□□□□ 0.57
ATF3P18847 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC18.63■□□□□ 0.57
ATF3P18847 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ATF3P18847 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC18.63■□□□□ 0.57
ATF3P18847 CLK2P1-201ENST00000416636 1294 ntBASIC18.63■□□□□ 0.57
ATF3P18847 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC18.63■□□□□ 0.57
ATF3P18847 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC18.63■□□□□ 0.57
ATF3P18847 RN7SL477P-201ENST00000488440 286 ntBASIC18.63■□□□□ 0.57
ATF3P18847 AC098591.1-202ENST00000507914 937 ntBASIC18.63■□□□□ 0.57
ATF3P18847 FOS-205ENST00000555242 629 ntTSL 2 BASIC18.63■□□□□ 0.57
ATF3P18847 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC18.63■□□□□ 0.57
ATF3P18847 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ATF3P18847 AC069061.4-201ENST00000581294 1347 ntBASIC18.63■□□□□ 0.57
ATF3P18847 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ATF3P18847 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
ATF3P18847 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF3P18847 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.62■□□□□ 0.57
ATF3P18847 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
ATF3P18847 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ATF3P18847 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC18.62■□□□□ 0.57
ATF3P18847 SPTLC1P3-201ENST00000403408 259 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms