Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TOP2AP11388 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TOP2AP11388 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TOP2AP11388 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TOP2AP11388 AC073869.1-201ENST00000415574 2762 ntBASIC23.32■■□□□ 1.32
TOP2AP11388 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TOP2AP11388 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC23.32■■□□□ 1.32
TOP2AP11388 AC008040.5-201ENST00000599781 1781 ntBASIC23.32■■□□□ 1.32
TOP2AP11388 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TOP2AP11388 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
TOP2AP11388 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TOP2AP11388 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TOP2AP11388 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TOP2AP11388 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
TOP2AP11388 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC23.32■■□□□ 1.32
TOP2AP11388 AC079325.1-201ENST00000430386 857 ntBASIC23.32■■□□□ 1.32
TOP2AP11388 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC23.32■■□□□ 1.32
TOP2AP11388 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC23.32■■□□□ 1.32
TOP2AP11388 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC23.32■■□□□ 1.32
TOP2AP11388 NAT9-219ENST00000582524 573 ntTSL 4 BASIC23.32■■□□□ 1.32
TOP2AP11388 AL591926.3-201ENST00000611630 238 ntBASIC23.32■■□□□ 1.32
TOP2AP11388 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC23.32■■□□□ 1.32
TOP2AP11388 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC23.32■■□□□ 1.32
TOP2AP11388 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TOP2AP11388 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC23.32■■□□□ 1.32
TOP2AP11388 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TOP2AP11388 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC23.32■■□□□ 1.32
TOP2AP11388 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TOP2AP11388 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TOP2AP11388 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TOP2AP11388 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TOP2AP11388 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TOP2AP11388 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
TOP2AP11388 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TOP2AP11388 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TOP2AP11388 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC23.31■■□□□ 1.32
TOP2AP11388 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC23.31■■□□□ 1.32
TOP2AP11388 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC23.31■■□□□ 1.32
TOP2AP11388 AC116347.1-201ENST00000442824 720 ntBASIC23.31■■□□□ 1.32
TOP2AP11388 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TOP2AP11388 HINT1-204ENST00000506908 681 ntTSL 2 BASIC23.31■■□□□ 1.32
TOP2AP11388 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC23.31■■□□□ 1.32
TOP2AP11388 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC23.31■■□□□ 1.32
TOP2AP11388 AC108673.2-201ENST00000608909 565 ntBASIC23.31■■□□□ 1.32
TOP2AP11388 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC23.31■■□□□ 1.32
TOP2AP11388 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
TOP2AP11388 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TOP2AP11388 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
TOP2AP11388 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TOP2AP11388 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TOP2AP11388 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TOP2AP11388 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
TOP2AP11388 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TOP2AP11388 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TOP2AP11388 USP8-219ENST00000625664 1568 ntTSL 5 BASIC23.3■■□□□ 1.32
TOP2AP11388 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
TOP2AP11388 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TOP2AP11388 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC23.3■■□□□ 1.32
TOP2AP11388 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TOP2AP11388 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TOP2AP11388 AL391647.1-201ENST00000395664 511 ntBASIC23.3■■□□□ 1.32
TOP2AP11388 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TOP2AP11388 AC006273.1-201ENST00000606966 861 ntBASIC23.3■■□□□ 1.32
TOP2AP11388 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
TOP2AP11388 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TOP2AP11388 AC073862.3-201ENST00000624597 1648 ntBASIC23.3■■□□□ 1.32
TOP2AP11388 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TOP2AP11388 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC23.3■■□□□ 1.32
TOP2AP11388 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
TOP2AP11388 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TOP2AP11388 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC23.29■■□□□ 1.32
TOP2AP11388 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC23.29■■□□□ 1.32
TOP2AP11388 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC23.29■■□□□ 1.32
TOP2AP11388 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TOP2AP11388 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TOP2AP11388 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TOP2AP11388 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
TOP2AP11388 AC026884.1-201ENST00000418296 457 ntBASIC23.29■■□□□ 1.32
TOP2AP11388 AC074019.1-201ENST00000428788 1096 ntBASIC23.29■■□□□ 1.32
TOP2AP11388 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TOP2AP11388 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC23.29■■□□□ 1.32
TOP2AP11388 AACSP1-202ENST00000521412 1095 ntBASIC23.29■■□□□ 1.32
TOP2AP11388 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC23.29■■□□□ 1.32
TOP2AP11388 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC23.29■■□□□ 1.32
TOP2AP11388 AC091691.1-201ENST00000583587 1018 ntBASIC23.29■■□□□ 1.32
TOP2AP11388 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC23.29■■□□□ 1.32
TOP2AP11388 PPY-202ENST00000587006 431 ntTSL 3 BASIC23.29■■□□□ 1.32
TOP2AP11388 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC23.29■■□□□ 1.32
TOP2AP11388 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
TOP2AP11388 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
TOP2AP11388 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TOP2AP11388 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC23.29■■□□□ 1.32
TOP2AP11388 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TOP2AP11388 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TOP2AP11388 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TOP2AP11388 AC005154.3-201ENST00000419639 1393 ntBASIC23.29■■□□□ 1.32
TOP2AP11388 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
TOP2AP11388 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
TOP2AP11388 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TOP2AP11388 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms