Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 TRIM36-IT1-201ENST00000503723 881 ntBASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 AP003398.1-201ENST00000531124 318 ntBASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 DNM1P30-201ENST00000563586 452 ntBASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 AC005586.2-201ENST00000563946 837 ntBASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 AC138894.2-201ENST00000602838 371 ntBASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CCNYL3P0C7X3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 MIR193BHG-211ENST00000641433 5365 ntBASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 TCAM1P-207ENST00000485295 1537 ntBASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 FTH1P22-201ENST00000456305 520 ntBASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 MIR4522-201ENST00000584932 87 ntBASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 AC007881.3-201ENST00000608897 607 ntBASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 AP001065.2-201ENST00000617205 644 ntBASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 AC009560.1-201ENST00000620208 434 ntBASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CCNYL3P0C7X3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms