Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 OR8T1P-201ENST00000421347 918 ntBASIC11.2□□□□□ -0.62
UPK2O00526 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 HNRNPA1P2-207ENST00000432375 960 ntBASIC11.2□□□□□ -0.62
UPK2O00526 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 AL591846.1-201ENST00000451736 433 ntBASIC11.2□□□□□ -0.62
UPK2O00526 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 CD164-210ENST00000512821 964 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 FAM8A2P-201ENST00000528813 1142 ntBASIC11.2□□□□□ -0.62
UPK2O00526 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC11.2□□□□□ -0.62
UPK2O00526 CSH2-206ENST00000560142 749 ntTSL 5 BASIC11.2□□□□□ -0.62
UPK2O00526 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 MIR4259-201ENST00000584466 101 ntBASIC11.2□□□□□ -0.62
UPK2O00526 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC11.2□□□□□ -0.62
UPK2O00526 AC017083.2-201ENST00000608069 979 ntBASIC11.2□□□□□ -0.62
UPK2O00526 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
UPK2O00526 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC11.2□□□□□ -0.62
UPK2O00526 MIR6805-201ENST00000615055 62 ntBASIC11.2□□□□□ -0.62
UPK2O00526 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC11.2□□□□□ -0.62
UPK2O00526 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
UPK2O00526 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
UPK2O00526 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.2□□□□□ -0.62
UPK2O00526 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
UPK2O00526 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK2O00526 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
UPK2O00526 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
UPK2O00526 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.2□□□□□ -0.62
UPK2O00526 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.19□□□□□ -0.62
UPK2O00526 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 GHET1-201ENST00000627071 1906 ntBASIC11.19□□□□□ -0.62
UPK2O00526 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
UPK2O00526 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.19□□□□□ -0.62
UPK2O00526 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC11.19□□□□□ -0.62
UPK2O00526 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
UPK2O00526 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.19□□□□□ -0.62
UPK2O00526 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC11.19□□□□□ -0.62
UPK2O00526 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 RNA5SP359-201ENST00000364838 113 ntBASIC11.19□□□□□ -0.62
UPK2O00526 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
UPK2O00526 MIR658-201ENST00000385210 100 ntBASIC11.19□□□□□ -0.62
UPK2O00526 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC11.19□□□□□ -0.62
UPK2O00526 PTPA-218ENST00000435132 618 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC11.19□□□□□ -0.62
UPK2O00526 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC11.19□□□□□ -0.62
UPK2O00526 SERPINA13P-202ENST00000478994 924 ntBASIC11.19□□□□□ -0.62
UPK2O00526 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 SLC25A15P3-201ENST00000505530 290 ntBASIC11.19□□□□□ -0.62
UPK2O00526 AC116345.2-201ENST00000512837 523 ntBASIC11.19□□□□□ -0.62
UPK2O00526 RIT1-205ENST00000539040 919 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 AC013355.1-201ENST00000562625 723 ntBASIC11.19□□□□□ -0.62
UPK2O00526 AC005695.3-201ENST00000614522 232 ntBASIC11.19□□□□□ -0.62
UPK2O00526 AC079336.7-201ENST00000623428 1078 ntBASIC11.19□□□□□ -0.62
UPK2O00526 AL035252.4-201ENST00000624174 288 ntBASIC11.19□□□□□ -0.62
UPK2O00526 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
UPK2O00526 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms