Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 AC138761.6-201ENST00000583997 1423 ntBASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 OR2K2-202ENST00000374428 1038 ntBASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 AC008723.1-201ENST00000506922 207 ntBASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 MIR3907-201ENST00000579424 151 ntBASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 AC020922.3-201ENST00000595064 547 ntBASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 MKRN5P-201ENST00000445263 1467 ntBASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 RCC2P5-201ENST00000492126 1487 ntBASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH19Q8TAB3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 HINT2P1-201ENST00000419438 481 ntBASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 AC098934.1-203ENST00000442868 1262 ntBASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 AC007279.1-201ENST00000448547 837 ntBASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 DUTP3-201ENST00000450025 415 ntBASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 RN7SL788P-201ENST00000460504 316 ntBASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 AL133499.1-201ENST00000596207 608 ntBASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms