Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 Z98885.3-201ENST00000624882 1757 ntBASIC13.07□□□□□ -0.32
NUP43Q8NFH3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 AC020763.3-201ENST00000625095 2904 ntBASIC13.06□□□□□ -0.32
NUP43Q8NFH3 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 AC114271.1-201ENST00000612689 2813 ntBASIC13.06□□□□□ -0.32
NUP43Q8NFH3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 MIR1247-201ENST00000408206 136 ntBASIC13.06□□□□□ -0.32
NUP43Q8NFH3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 BX284668.4-201ENST00000453917 508 ntBASIC13.06□□□□□ -0.32
NUP43Q8NFH3 AKR7A2P1-201ENST00000460134 915 ntBASIC13.06□□□□□ -0.32
NUP43Q8NFH3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 NDUFV2P1-201ENST00000596415 907 ntBASIC13.06□□□□□ -0.32
NUP43Q8NFH3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 MIR6799-201ENST00000620297 69 ntBASIC13.06□□□□□ -0.32
NUP43Q8NFH3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 ZNF493-208ENST00000599461 1769 ntBASIC13.06□□□□□ -0.32
NUP43Q8NFH3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.06□□□□□ -0.32
NUP43Q8NFH3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.05□□□□□ -0.32
NUP43Q8NFH3 CICP8-201ENST00000455800 2813 ntBASIC13.05□□□□□ -0.32
NUP43Q8NFH3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 GPAA1P2-201ENST00000417923 928 ntBASIC13.05□□□□□ -0.32
NUP43Q8NFH3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 RPSAP15-201ENST00000448168 861 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms