Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM48Q8IWZ4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM48Q8IWZ4 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 OR5BD1P-201ENST00000532527 817 ntBASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 HERC2P11-201ENST00000562845 725 ntBASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 AC100756.2-201ENST00000569537 736 ntBASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 AC138894.2-201ENST00000602838 371 ntBASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 AP000322.3-201ENST00000608665 388 ntBASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM48Q8IWZ4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 SHMT1P1-201ENST00000419974 1312 ntBASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 FXNP2-201ENST00000411625 547 ntBASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 RPL7P35-201ENST00000446943 740 ntBASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 MPRIPP1-201ENST00000452433 1089 ntBASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
TRIM48Q8IWZ4 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms