Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIF1Q5UIP0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 RN7SL134P-201ENST00000579756 303 ntBASIC13.22□□□□□ -0.29
RIF1Q5UIP0 MIR4526-201ENST00000583168 87 ntBASIC13.22□□□□□ -0.29
RIF1Q5UIP0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 MESTP4-201ENST00000412333 1204 ntBASIC13.22□□□□□ -0.29
RIF1Q5UIP0 HNRNPA1P30-202ENST00000440699 997 ntBASIC13.22□□□□□ -0.29
RIF1Q5UIP0 AL391822.1-201ENST00000452580 562 ntBASIC13.22□□□□□ -0.29
RIF1Q5UIP0 AC108082.1-201ENST00000510857 331 ntBASIC13.22□□□□□ -0.29
RIF1Q5UIP0 AC017100.1-201ENST00000565978 1169 ntBASIC13.22□□□□□ -0.29
RIF1Q5UIP0 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RIF1Q5UIP0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 AC006987.4-201ENST00000430032 279 ntBASIC13.21□□□□□ -0.29
RIF1Q5UIP0 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 ALOX12P1-201ENST00000579299 1229 ntBASIC13.21□□□□□ -0.29
RIF1Q5UIP0 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 AC096677.3-201ENST00000413162 387 ntBASIC13.21□□□□□ -0.29
RIF1Q5UIP0 AC087163.1-201ENST00000430089 381 ntBASIC13.21□□□□□ -0.29
RIF1Q5UIP0 AKR1C6P-201ENST00000432950 983 ntBASIC13.21□□□□□ -0.29
RIF1Q5UIP0 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 AC145285.1-201ENST00000469929 694 ntBASIC13.21□□□□□ -0.29
RIF1Q5UIP0 CXXC1P1-202ENST00000489409 1212 ntBASIC13.21□□□□□ -0.29
RIF1Q5UIP0 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 EEF1DP8-201ENST00000534760 536 ntBASIC13.21□□□□□ -0.29
RIF1Q5UIP0 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 CARS-216ENST00000639317 135 ntTSL 5 BASIC13.21□□□□□ -0.29
RIF1Q5UIP0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RIF1Q5UIP0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.21□□□□□ -0.3
RIF1Q5UIP0 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms