Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 MIR1307-201ENST00000408840 149 ntBASIC12.7□□□□□ -0.38
CACNA1BQ00975 CD37-203ENST00000426897 1204 ntTSL 2 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 AC012100.1-201ENST00000470304 282 ntBASIC12.7□□□□□ -0.38
CACNA1BQ00975 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 AC007032.1-201ENST00000609281 847 ntBASIC12.7□□□□□ -0.38
CACNA1BQ00975 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC12.7□□□□□ -0.38
CACNA1BQ00975 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 AC090616.6-203ENST00000579186 1945 ntBASIC12.69□□□□□ -0.38
CACNA1BQ00975 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 SALL4P6-201ENST00000429385 1691 ntBASIC12.69□□□□□ -0.38
CACNA1BQ00975 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 CD300A-201ENST00000310828 631 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 PGAM1P10-201ENST00000402426 761 ntBASIC12.69□□□□□ -0.38
CACNA1BQ00975 RPL18AP2-201ENST00000450007 482 ntBASIC12.69□□□□□ -0.38
CACNA1BQ00975 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 OR7E126P-201ENST00000526217 888 ntBASIC12.69□□□□□ -0.38
CACNA1BQ00975 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 AL391005.1-201ENST00000623953 2435 ntBASIC12.69□□□□□ -0.38
CACNA1BQ00975 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.69□□□□□ -0.38
CACNA1BQ00975 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CACNA1BQ00975 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 PDCD4-AS1-201ENST00000420367 778 ntTSL 2 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 AP001476.2-201ENST00000435738 355 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 AC015909.2-201ENST00000523083 547 ntTSL 3 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 AP005018.2-201ENST00000528464 822 ntBASIC12.68□□□□□ -0.38
CACNA1BQ00975 AC106782.3-201ENST00000563429 258 ntBASIC12.68□□□□□ -0.38
CACNA1BQ00975 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 LINC00470-211ENST00000584492 1281 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 AC026120.2-201ENST00000617239 309 ntBASIC12.68□□□□□ -0.38
CACNA1BQ00975 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms