Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.98□□□□□ -0.17
AP1S1P61966 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.98□□□□□ -0.17
AP1S1P61966 RPL7P35-201ENST00000446943 740 ntBASIC13.98□□□□□ -0.17
AP1S1P61966 STK24P1-201ENST00000455035 1291 ntBASIC13.98□□□□□ -0.17
AP1S1P61966 DPY19L2P5-201ENST00000456300 331 ntBASIC13.98□□□□□ -0.17
AP1S1P61966 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.98□□□□□ -0.17
AP1S1P61966 AC025186.1-201ENST00000478174 870 ntBASIC13.98□□□□□ -0.17
AP1S1P61966 RN7SL375P-201ENST00000492442 298 ntBASIC13.98□□□□□ -0.17
AP1S1P61966 IGHV1-12-201ENST00000518307 205 ntBASIC13.98□□□□□ -0.17
AP1S1P61966 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.98□□□□□ -0.17
AP1S1P61966 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.98□□□□□ -0.17
AP1S1P61966 AL132994.1-201ENST00000554098 400 ntBASIC13.98□□□□□ -0.17
AP1S1P61966 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.98□□□□□ -0.17
AP1S1P61966 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.98□□□□□ -0.17
AP1S1P61966 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
AP1S1P61966 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 AL365181.3-201ENST00000605886 3222 ntBASIC13.98□□□□□ -0.17
AP1S1P61966 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
AP1S1P61966 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
AP1S1P61966 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
AP1S1P61966 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC13.98□□□□□ -0.17
AP1S1P61966 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.98□□□□□ -0.17
AP1S1P61966 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AP1S1P61966 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.98□□□□□ -0.17
AP1S1P61966 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 AC117503.4-201ENST00000623229 1418 ntBASIC13.98□□□□□ -0.17
AP1S1P61966 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
AP1S1P61966 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 AL359845.1-201ENST00000458202 1648 ntBASIC13.97□□□□□ -0.17
AP1S1P61966 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AP1S1P61966 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
AP1S1P61966 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 AC073210.1-201ENST00000414799 232 ntBASIC13.97□□□□□ -0.17
AP1S1P61966 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC13.97□□□□□ -0.17
AP1S1P61966 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.97□□□□□ -0.17
AP1S1P61966 AC069218.1-201ENST00000435269 762 ntBASIC13.97□□□□□ -0.17
AP1S1P61966 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.97□□□□□ -0.17
AP1S1P61966 AC079112.1-201ENST00000454972 939 ntBASIC13.97□□□□□ -0.17
AP1S1P61966 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC13.97□□□□□ -0.17
AP1S1P61966 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 AC068867.1-201ENST00000559855 150 ntBASIC13.97□□□□□ -0.17
AP1S1P61966 DNM1P30-201ENST00000563586 452 ntBASIC13.97□□□□□ -0.17
AP1S1P61966 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 RN7SL357P-201ENST00000581065 298 ntBASIC13.97□□□□□ -0.17
AP1S1P61966 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.97□□□□□ -0.17
AP1S1P61966 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.97□□□□□ -0.17
AP1S1P61966 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.97□□□□□ -0.17
AP1S1P61966 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AP1S1P61966 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AP1S1P61966 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.97□□□□□ -0.17
AP1S1P61966 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 AC005840.4-201ENST00000541242 2494 ntBASIC13.97□□□□□ -0.17
AP1S1P61966 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S1P61966 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms