Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC16.16■□□□□ 0.18
RHBDL3P58872 AL009178.2-201ENST00000597278 2719 ntBASIC16.16■□□□□ 0.18
RHBDL3P58872 AP000437.1-201ENST00000624057 2085 ntBASIC16.16■□□□□ 0.18
RHBDL3P58872 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC16.16■□□□□ 0.18
RHBDL3P58872 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC16.16■□□□□ 0.18
RHBDL3P58872 ACTBP7-201ENST00000418351 1124 ntBASIC16.16■□□□□ 0.18
RHBDL3P58872 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RHBDL3P58872 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC16.16■□□□□ 0.18
RHBDL3P58872 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC16.16■□□□□ 0.18
RHBDL3P58872 PHBP18-201ENST00000546648 813 ntBASIC16.16■□□□□ 0.18
RHBDL3P58872 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.16■□□□□ 0.18
RHBDL3P58872 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC16.16■□□□□ 0.18
RHBDL3P58872 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC16.16■□□□□ 0.18
RHBDL3P58872 Z82244.1-201ENST00000631502 840 ntBASIC16.16■□□□□ 0.18
RHBDL3P58872 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RHBDL3P58872 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.16■□□□□ 0.18
RHBDL3P58872 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.16■□□□□ 0.18
RHBDL3P58872 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RHBDL3P58872 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 FAM226B-201ENST00000602508 1490 ntBASIC16.16■□□□□ 0.18
RHBDL3P58872 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDL3P58872 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RHBDL3P58872 AL136379.1-201ENST00000623471 2642 ntBASIC16.15■□□□□ 0.18
RHBDL3P58872 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RHBDL3P58872 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RHBDL3P58872 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDL3P58872 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDL3P58872 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDL3P58872 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RHBDL3P58872 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RHBDL3P58872 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDL3P58872 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RHBDL3P58872 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDL3P58872 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RHBDL3P58872 CCND3P1-201ENST00000438347 580 ntBASIC16.15■□□□□ 0.18
RHBDL3P58872 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDL3P58872 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC16.15■□□□□ 0.18
RHBDL3P58872 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDL3P58872 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC16.15■□□□□ 0.18
RHBDL3P58872 RPS18P9-201ENST00000482817 460 ntBASIC16.15■□□□□ 0.18
RHBDL3P58872 BCRP4-201ENST00000506079 804 ntBASIC16.15■□□□□ 0.18
RHBDL3P58872 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDL3P58872 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC16.15■□□□□ 0.18
RHBDL3P58872 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC16.15■□□□□ 0.18
RHBDL3P58872 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDL3P58872 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDL3P58872 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RHBDL3P58872 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDL3P58872 ABCD1P2-201ENST00000429313 1601 ntBASIC16.15■□□□□ 0.18
RHBDL3P58872 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDL3P58872 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDL3P58872 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC16.14■□□□□ 0.18
RHBDL3P58872 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDL3P58872 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDL3P58872 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
RHBDL3P58872 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDL3P58872 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDL3P58872 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDL3P58872 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDL3P58872 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDL3P58872 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDL3P58872 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC16.14■□□□□ 0.17
RHBDL3P58872 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDL3P58872 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.14■□□□□ 0.17
RHBDL3P58872 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDL3P58872 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDL3P58872 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RHBDL3P58872 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RHBDL3P58872 GH1-203ENST00000351388 685 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDL3P58872 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms