Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC10.22□□□□□ -0.77
APOC4P55056 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC10.22□□□□□ -0.77
APOC4P55056 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
APOC4P55056 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.22□□□□□ -0.77
APOC4P55056 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC10.22□□□□□ -0.77
APOC4P55056 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.22□□□□□ -0.77
APOC4P55056 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 BAK1P1-201ENST00000317045 636 ntBASIC10.22□□□□□ -0.77
APOC4P55056 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 RNVU1-8-201ENST00000364272 125 ntBASIC10.22□□□□□ -0.77
APOC4P55056 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
APOC4P55056 OR7E115P-201ENST00000382617 1024 ntBASIC10.22□□□□□ -0.77
APOC4P55056 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC10.22□□□□□ -0.77
APOC4P55056 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC10.22□□□□□ -0.77
APOC4P55056 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 RPL35P9-201ENST00000446059 350 ntBASIC10.22□□□□□ -0.77
APOC4P55056 LYPLA2P1-203ENST00000447689 696 ntBASIC10.22□□□□□ -0.77
APOC4P55056 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC10.22□□□□□ -0.77
APOC4P55056 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC10.22□□□□□ -0.77
APOC4P55056 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC10.22□□□□□ -0.77
APOC4P55056 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC10.22□□□□□ -0.77
APOC4P55056 AC100858.1-201ENST00000514059 1228 ntBASIC10.22□□□□□ -0.77
APOC4P55056 TMCO5B-205ENST00000530020 894 ntBASIC10.22□□□□□ -0.77
APOC4P55056 AC226150.1-201ENST00000544259 466 ntBASIC10.22□□□□□ -0.77
APOC4P55056 BATF-202ENST00000555504 361 ntTSL 2 BASIC10.22□□□□□ -0.77
APOC4P55056 AC068867.1-201ENST00000559855 150 ntBASIC10.22□□□□□ -0.77
APOC4P55056 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
APOC4P55056 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC10.22□□□□□ -0.77
APOC4P55056 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC10.22□□□□□ -0.77
APOC4P55056 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 AC105137.3-201ENST00000617588 984 ntBASIC10.22□□□□□ -0.77
APOC4P55056 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
APOC4P55056 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC10.22□□□□□ -0.77
APOC4P55056 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC10.22□□□□□ -0.77
APOC4P55056 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC10.22□□□□□ -0.77
APOC4P55056 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC10.22□□□□□ -0.77
APOC4P55056 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
APOC4P55056 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 FAM45BP-202ENST00000592932 1624 ntBASIC10.22□□□□□ -0.77
APOC4P55056 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOC4P55056 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 AC025271.4-201ENST00000621477 1726 ntBASIC10.21□□□□□ -0.77
APOC4P55056 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.21□□□□□ -0.77
APOC4P55056 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 TKT-201ENST00000296289 1931 ntTSL 5 BASIC10.21□□□□□ -0.77
APOC4P55056 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC10.21□□□□□ -0.77
APOC4P55056 AC016397.2-201ENST00000624848 1985 ntBASIC10.21□□□□□ -0.77
APOC4P55056 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
APOC4P55056 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
APOC4P55056 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 AC090643.2-201ENST00000623442 2029 ntBASIC10.21□□□□□ -0.77
APOC4P55056 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC10.21□□□□□ -0.77
APOC4P55056 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms