Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC15.29■□□□□ 0.04
CDK7P50613 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.29■□□□□ 0.04
CDK7P50613 AC026120.2-201ENST00000617239 309 ntBASIC15.29■□□□□ 0.04
CDK7P50613 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC15.29■□□□□ 0.04
CDK7P50613 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC15.29■□□□□ 0.04
CDK7P50613 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.29■□□□□ 0.04
CDK7P50613 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDK7P50613 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 AL365209.1-201ENST00000624418 6473 ntBASIC15.29■□□□□ 0.04
CDK7P50613 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
CDK7P50613 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
CDK7P50613 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDK7P50613 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.29■□□□□ 0.04
CDK7P50613 BX640514.1-201ENST00000583223 1918 ntBASIC15.29■□□□□ 0.04
CDK7P50613 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.29■□□□□ 0.04
CDK7P50613 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CDK7P50613 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDK7P50613 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.28■□□□□ 0.04
CDK7P50613 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDK7P50613 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDK7P50613 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.28■□□□□ 0.04
CDK7P50613 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDK7P50613 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDK7P50613 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDK7P50613 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CDK7P50613 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.28■□□□□ 0.04
CDK7P50613 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDK7P50613 HDGF-202ENST00000368206 960 ntTSL 5 BASIC15.28■□□□□ 0.04
CDK7P50613 CCL19-202ENST00000378800 414 ntTSL 2 BASIC15.28■□□□□ 0.04
CDK7P50613 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC15.28■□□□□ 0.04
CDK7P50613 USP17L6P-201ENST00000382470 1197 ntBASIC15.28■□□□□ 0.04
CDK7P50613 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC15.28■□□□□ 0.04
CDK7P50613 VDAC1P11-201ENST00000458323 852 ntBASIC15.28■□□□□ 0.04
CDK7P50613 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC15.28■□□□□ 0.04
CDK7P50613 AC147876.1-201ENST00000504408 322 ntBASIC15.28■□□□□ 0.04
CDK7P50613 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC15.28■□□□□ 0.04
CDK7P50613 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC15.28■□□□□ 0.04
CDK7P50613 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CDK7P50613 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.28■□□□□ 0.04
CDK7P50613 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.28■□□□□ 0.04
CDK7P50613 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDK7P50613 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.28■□□□□ 0.04
CDK7P50613 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDK7P50613 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CDK7P50613 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CDK7P50613 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDK7P50613 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CDK7P50613 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDK7P50613 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDK7P50613 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDK7P50613 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDK7P50613 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDK7P50613 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC15.27■□□□□ 0.04
CDK7P50613 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDK7P50613 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
CDK7P50613 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.27■□□□□ 0.04
CDK7P50613 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.27■□□□□ 0.04
CDK7P50613 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDK7P50613 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC15.27■□□□□ 0.04
CDK7P50613 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC15.27■□□□□ 0.04
CDK7P50613 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.27■□□□□ 0.04
CDK7P50613 PGK1P2-201ENST00000431702 1214 ntBASIC15.27■□□□□ 0.04
CDK7P50613 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC15.27■□□□□ 0.04
CDK7P50613 KRT19P4-201ENST00000443208 943 ntBASIC15.27■□□□□ 0.04
CDK7P50613 RNU1-80P-201ENST00000459500 161 ntBASIC15.27■□□□□ 0.04
CDK7P50613 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC15.27■□□□□ 0.04
CDK7P50613 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC15.27■□□□□ 0.04
CDK7P50613 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.27■□□□□ 0.04
CDK7P50613 FAM187B2P-201ENST00000577135 713 ntBASIC15.27■□□□□ 0.04
CDK7P50613 AC090510.3-201ENST00000615831 821 ntBASIC15.27■□□□□ 0.04
CDK7P50613 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC15.27■□□□□ 0.04
CDK7P50613 BX322534.1-201ENST00000635574 241 ntBASIC15.27■□□□□ 0.04
CDK7P50613 AC215524.1-201ENST00000635696 241 ntBASIC15.27■□□□□ 0.04
CDK7P50613 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDK7P50613 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.27■□□□□ 0.03
CDK7P50613 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms