Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 SNORA50C-201ENST00000408535 133 ntBASIC15.35■□□□□ 0.05
RFC5P40937 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC15.35■□□□□ 0.05
RFC5P40937 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC15.35■□□□□ 0.05
RFC5P40937 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.35■□□□□ 0.05
RFC5P40937 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.35■□□□□ 0.05
RFC5P40937 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.35■□□□□ 0.05
RFC5P40937 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.35■□□□□ 0.05
RFC5P40937 SNORA50.1-201ENST00000628590 135 ntBASIC15.35■□□□□ 0.05
RFC5P40937 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RFC5P40937 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.35■□□□□ 0.05
RFC5P40937 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RFC5P40937 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.34■□□□□ 0.05
RFC5P40937 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RFC5P40937 AL356585.2-201ENST00000625078 2396 ntBASIC15.34■□□□□ 0.05
RFC5P40937 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
RFC5P40937 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.34■□□□□ 0.05
RFC5P40937 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RFC5P40937 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 ABCD1P4-201ENST00000399687 604 ntBASIC15.34■□□□□ 0.05
RFC5P40937 ACTBP14-201ENST00000411655 1089 ntBASIC15.34■□□□□ 0.05
RFC5P40937 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.34■□□□□ 0.05
RFC5P40937 AC012362.1-201ENST00000434906 739 ntBASIC15.34■□□□□ 0.05
RFC5P40937 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.34■□□□□ 0.05
RFC5P40937 GNG10P1-201ENST00000452289 199 ntBASIC15.34■□□□□ 0.05
RFC5P40937 LDHBP1-201ENST00000455730 1119 ntBASIC15.34■□□□□ 0.05
RFC5P40937 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.34■□□□□ 0.05
RFC5P40937 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.34■□□□□ 0.05
RFC5P40937 AL356740.1-201ENST00000602192 1297 ntBASIC15.34■□□□□ 0.05
RFC5P40937 OR13I1P-201ENST00000609811 1264 ntBASIC15.34■□□□□ 0.05
RFC5P40937 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
RFC5P40937 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.34■□□□□ 0.05
RFC5P40937 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.34■□□□□ 0.05
RFC5P40937 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.34■□□□□ 0.05
RFC5P40937 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.34■□□□□ 0.05
RFC5P40937 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.34■□□□□ 0.05
RFC5P40937 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.34■□□□□ 0.05
RFC5P40937 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC5P40937 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RFC5P40937 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
RFC5P40937 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RFC5P40937 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.33■□□□□ 0.05
RFC5P40937 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RFC5P40937 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.33■□□□□ 0.05
RFC5P40937 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RFC5P40937 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RFC5P40937 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.33■□□□□ 0.04
RFC5P40937 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
RFC5P40937 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFC5P40937 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms