Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6BP35913 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6BP35913 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.92■□□□□ 0.3
PDE6BP35913 AC012617.1-204ENST00000586340 2305 ntBASIC16.92■□□□□ 0.3
PDE6BP35913 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PDE6BP35913 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6BP35913 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6BP35913 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6BP35913 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6BP35913 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6BP35913 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.92■□□□□ 0.3
PDE6BP35913 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.92■□□□□ 0.3
PDE6BP35913 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PDE6BP35913 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
PDE6BP35913 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.91■□□□□ 0.3
PDE6BP35913 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 AC011477.7-201ENST00000617163 1440 ntBASIC16.91■□□□□ 0.3
PDE6BP35913 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC16.91■□□□□ 0.3
PDE6BP35913 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC16.91■□□□□ 0.3
PDE6BP35913 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC16.91■□□□□ 0.3
PDE6BP35913 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 AC142086.5-202ENST00000562500 217 ntBASIC16.91■□□□□ 0.3
PDE6BP35913 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDE6BP35913 CLPP-205ENST00000596605 646 ntTSL 2 BASIC16.91■□□□□ 0.3
PDE6BP35913 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC16.91■□□□□ 0.3
PDE6BP35913 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC16.91■□□□□ 0.3
PDE6BP35913 AC008622.3-201ENST00000621170 600 ntBASIC16.91■□□□□ 0.3
PDE6BP35913 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 AC026271.1-201ENST00000447794 1348 ntBASIC16.91■□□□□ 0.3
PDE6BP35913 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.91■□□□□ 0.3
PDE6BP35913 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PDE6BP35913 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDE6BP35913 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PDE6BP35913 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PDE6BP35913 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
PDE6BP35913 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PDE6BP35913 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.9■□□□□ 0.3
PDE6BP35913 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 TPT1P9-201ENST00000413759 514 ntBASIC16.9■□□□□ 0.3
PDE6BP35913 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC16.9■□□□□ 0.3
PDE6BP35913 CDKN2A-AS1-201ENST00000441769 823 ntBASIC16.9■□□□□ 0.3
PDE6BP35913 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PDE6BP35913 AC113398.1-201ENST00000464124 406 ntBASIC16.9■□□□□ 0.3
PDE6BP35913 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC16.9■□□□□ 0.3
PDE6BP35913 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC16.9■□□□□ 0.3
PDE6BP35913 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC16.9■□□□□ 0.3
PDE6BP35913 EEF1DP7-201ENST00000580496 513 ntBASIC16.9■□□□□ 0.3
PDE6BP35913 RN7SL478P-201ENST00000584358 298 ntBASIC16.9■□□□□ 0.3
PDE6BP35913 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC16.9■□□□□ 0.3
PDE6BP35913 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC16.9■□□□□ 0.3
PDE6BP35913 SNX20-205ENST00000610485 557 ntTSL 5 BASIC16.9■□□□□ 0.3
PDE6BP35913 BAP1-211ENST00000615113 489 ntBASIC16.9■□□□□ 0.3
PDE6BP35913 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.9■□□□□ 0.3
PDE6BP35913 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 AC008038.1-201ENST00000634247 1314 ntBASIC16.9■□□□□ 0.3
PDE6BP35913 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PDE6BP35913 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PDE6BP35913 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PDE6BP35913 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6BP35913 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDE6BP35913 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDE6BP35913 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDE6BP35913 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDE6BP35913 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.89■□□□□ 0.3
PDE6BP35913 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PDE6BP35913 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
PDE6BP35913 AC015802.1-201ENST00000588104 1449 ntBASIC16.89■□□□□ 0.29
PDE6BP35913 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms