Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LYPD4-201ENST00000343055 1051 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RXRBP28702 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC17.59■□□□□ 0.41
RXRBP28702 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC17.59■□□□□ 0.41
RXRBP28702 AC113346.2-201ENST00000502684 457 ntTSL 5 BASIC17.59■□□□□ 0.41
RXRBP28702 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RXRBP28702 LYPD4-202ENST00000601246 1076 ntTSL 5 BASIC17.59■□□□□ 0.41
RXRBP28702 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RXRBP28702 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
RXRBP28702 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RXRBP28702 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RXRBP28702 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RXRBP28702 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RXRBP28702 AC136621.1-201ENST00000624017 2304 ntBASIC17.59■□□□□ 0.41
RXRBP28702 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RXRBP28702 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RXRBP28702 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RXRBP28702 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RXRBP28702 HYMAI-201ENST00000635591 3347 ntBASIC17.59■□□□□ 0.41
RXRBP28702 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.59■□□□□ 0.41
RXRBP28702 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RXRBP28702 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RXRBP28702 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RXRBP28702 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RXRBP28702 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RXRBP28702 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.58■□□□□ 0.41
RXRBP28702 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RXRBP28702 DDX6P2-201ENST00000619520 1455 ntBASIC17.58■□□□□ 0.41
RXRBP28702 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RXRBP28702 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RXRBP28702 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RXRBP28702 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RXRBP28702 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RXRBP28702 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC17.58■□□□□ 0.4
RXRBP28702 TSEN15P3-201ENST00000422363 367 ntBASIC17.58■□□□□ 0.4
RXRBP28702 AC091893.1-201ENST00000503772 399 ntBASIC17.58■□□□□ 0.4
RXRBP28702 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC17.58■□□□□ 0.4
RXRBP28702 CD63-212ENST00000552067 621 ntTSL 5 BASIC17.58■□□□□ 0.4
RXRBP28702 AP005121.2-201ENST00000583306 1101 ntBASIC17.58■□□□□ 0.4
RXRBP28702 AFMID-205ENST00000586731 550 ntTSL 3 BASIC17.58■□□□□ 0.4
RXRBP28702 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC17.58■□□□□ 0.4
RXRBP28702 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC17.58■□□□□ 0.4
RXRBP28702 AC108673.2-201ENST00000608909 565 ntBASIC17.58■□□□□ 0.4
RXRBP28702 RN7SL238P-201ENST00000613832 290 ntBASIC17.58■□□□□ 0.4
RXRBP28702 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC17.58■□□□□ 0.4
RXRBP28702 RN7SL106P-201ENST00000618104 290 ntBASIC17.58■□□□□ 0.4
RXRBP28702 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RXRBP28702 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RXRBP28702 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RXRBP28702 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RXRBP28702 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.58■□□□□ 0.4
RXRBP28702 AL596257.1-201ENST00000641463 2694 ntBASIC17.58■□□□□ 0.4
RXRBP28702 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RXRBP28702 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.58■□□□□ 0.4
RXRBP28702 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RXRBP28702 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RXRBP28702 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RXRBP28702 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RXRBP28702 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RXRBP28702 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
RXRBP28702 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RXRBP28702 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RXRBP28702 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.58■□□□□ 0.4
RXRBP28702 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.57■□□□□ 0.4
RXRBP28702 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RXRBP28702 AC006486.2-201ENST00000624246 2199 ntBASIC17.57■□□□□ 0.4
RXRBP28702 CSMD2-202ENST00000338325 1544 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 AKTIP-201ENST00000300245 2133 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
RXRBP28702 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.57■□□□□ 0.4
RXRBP28702 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 AP000925.1-201ENST00000425960 1449 ntBASIC17.57■□□□□ 0.4
RXRBP28702 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.57■□□□□ 0.4
RXRBP28702 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC17.57■□□□□ 0.4
RXRBP28702 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 RN7SKP245-201ENST00000364025 320 ntBASIC17.57■□□□□ 0.4
RXRBP28702 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC17.57■□□□□ 0.4
RXRBP28702 PFN1P3-201ENST00000443612 402 ntBASIC17.57■□□□□ 0.4
RXRBP28702 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC17.57■□□□□ 0.4
RXRBP28702 PFN1P4-201ENST00000450970 402 ntBASIC17.57■□□□□ 0.4
RXRBP28702 IQCJ-202ENST00000451172 885 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC17.57■□□□□ 0.4
RXRBP28702 IGHVII-33-1-201ENST00000524010 280 ntBASIC17.57■□□□□ 0.4
RXRBP28702 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 MYL6-210ENST00000548400 573 ntTSL 3 BASIC17.57■□□□□ 0.4
RXRBP28702 AC110285.1-201ENST00000572077 665 ntTSL 3 BASIC17.57■□□□□ 0.4
RXRBP28702 PTPRT-212ENST00000620410 940 ntTSL 5 BASIC17.57■□□□□ 0.4
RXRBP28702 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RXRBP28702 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.57■□□□□ 0.4
RXRBP28702 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RXRBP28702 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.57■□□□□ 0.4
RXRBP28702 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms