Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
EPHA1P21709 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.11□□□□□ -0.47
EPHA1P21709 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.11□□□□□ -0.47
EPHA1P21709 AC011498.7-201ENST00000624986 2027 ntBASIC12.11□□□□□ -0.47
EPHA1P21709 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.11□□□□□ -0.47
EPHA1P21709 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.11□□□□□ -0.47
EPHA1P21709 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.11□□□□□ -0.47
EPHA1P21709 AC020910.5-201ENST00000623668 1865 ntBASIC12.11□□□□□ -0.47
EPHA1P21709 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.11□□□□□ -0.47
EPHA1P21709 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.11□□□□□ -0.47
EPHA1P21709 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
EPHA1P21709 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
EPHA1P21709 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.11□□□□□ -0.47
EPHA1P21709 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 MIR33B-201ENST00000385104 96 ntBASIC12.11□□□□□ -0.47
EPHA1P21709 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
EPHA1P21709 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.11□□□□□ -0.47
EPHA1P21709 AL596276.2-201ENST00000447525 331 ntBASIC12.11□□□□□ -0.47
EPHA1P21709 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.11□□□□□ -0.47
EPHA1P21709 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.11□□□□□ -0.47
EPHA1P21709 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.11□□□□□ -0.47
EPHA1P21709 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.11□□□□□ -0.47
EPHA1P21709 AC125604.1-201ENST00000496255 707 ntBASIC12.11□□□□□ -0.47
EPHA1P21709 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.11□□□□□ -0.47
EPHA1P21709 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.11□□□□□ -0.47
EPHA1P21709 AC006518.1-201ENST00000541449 943 ntBASIC12.11□□□□□ -0.47
EPHA1P21709 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.11□□□□□ -0.47
EPHA1P21709 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
EPHA1P21709 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.11□□□□□ -0.47
EPHA1P21709 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 AC009955.4-201ENST00000597192 544 ntBASIC12.11□□□□□ -0.47
EPHA1P21709 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.11□□□□□ -0.47
EPHA1P21709 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 AC138696.2-201ENST00000607376 223 ntBASIC12.11□□□□□ -0.47
EPHA1P21709 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.11□□□□□ -0.47
EPHA1P21709 U62317.3-201ENST00000608319 855 ntBASIC12.11□□□□□ -0.47
EPHA1P21709 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.11□□□□□ -0.47
EPHA1P21709 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.11□□□□□ -0.47
EPHA1P21709 NAP1L6-202ENST00000641404 1222 ntBASIC12.11□□□□□ -0.47
EPHA1P21709 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
EPHA1P21709 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
EPHA1P21709 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
EPHA1P21709 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
EPHA1P21709 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
EPHA1P21709 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.11□□□□□ -0.47
EPHA1P21709 AC015909.5-201ENST00000624336 2266 ntBASIC12.11□□□□□ -0.47
EPHA1P21709 AL138725.1-201ENST00000407347 1314 ntBASIC12.11□□□□□ -0.47
EPHA1P21709 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
EPHA1P21709 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 HSPA8P5-201ENST00000456928 2069 ntBASIC12.1□□□□□ -0.47
EPHA1P21709 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.1□□□□□ -0.47
EPHA1P21709 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.1□□□□□ -0.47
EPHA1P21709 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.1□□□□□ -0.47
EPHA1P21709 AL445209.1-201ENST00000607269 3491 ntBASIC12.1□□□□□ -0.47
EPHA1P21709 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
EPHA1P21709 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 AC020658.7-201ENST00000624274 2442 ntBASIC12.1□□□□□ -0.47
EPHA1P21709 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 AC003102.2-201ENST00000589195 1469 ntBASIC12.1□□□□□ -0.47
EPHA1P21709 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
EPHA1P21709 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.1□□□□□ -0.47
EPHA1P21709 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
EPHA1P21709 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms