Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.19□□□□□ -0.14
NFKB1P19838 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.19□□□□□ -0.14
NFKB1P19838 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.19□□□□□ -0.14
NFKB1P19838 AC026320.2-201ENST00000434379 478 ntBASIC14.19□□□□□ -0.14
NFKB1P19838 AC006335.1-201ENST00000445200 547 ntBASIC14.19□□□□□ -0.14
NFKB1P19838 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.19□□□□□ -0.14
NFKB1P19838 AC114947.1-202ENST00000514136 344 ntBASIC14.19□□□□□ -0.14
NFKB1P19838 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NFKB1P19838 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.19□□□□□ -0.14
NFKB1P19838 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.19□□□□□ -0.14
NFKB1P19838 RN7SL602P-201ENST00000578326 324 ntBASIC14.19□□□□□ -0.14
NFKB1P19838 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.19□□□□□ -0.14
NFKB1P19838 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NFKB1P19838 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NFKB1P19838 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NFKB1P19838 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NFKB1P19838 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 AC114271.1-201ENST00000612689 2813 ntBASIC14.19□□□□□ -0.14
NFKB1P19838 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.18□□□□□ -0.14
NFKB1P19838 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NFKB1P19838 AL355102.3-201ENST00000554299 1678 ntBASIC14.18□□□□□ -0.14
NFKB1P19838 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
NFKB1P19838 CICP8-201ENST00000455800 2813 ntBASIC14.18□□□□□ -0.14
NFKB1P19838 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NFKB1P19838 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.18□□□□□ -0.14
NFKB1P19838 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
NFKB1P19838 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.18□□□□□ -0.14
NFKB1P19838 CALR4P-201ENST00000431943 946 ntBASIC14.18□□□□□ -0.14
NFKB1P19838 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.18□□□□□ -0.14
NFKB1P19838 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.18□□□□□ -0.14
NFKB1P19838 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.18□□□□□ -0.14
NFKB1P19838 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.18□□□□□ -0.14
NFKB1P19838 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.18□□□□□ -0.14
NFKB1P19838 AC008723.1-201ENST00000506922 207 ntBASIC14.18□□□□□ -0.14
NFKB1P19838 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC14.18□□□□□ -0.14
NFKB1P19838 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.18□□□□□ -0.14
NFKB1P19838 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.18□□□□□ -0.14
NFKB1P19838 AC026803.1-201ENST00000569130 274 ntBASIC14.18□□□□□ -0.14
NFKB1P19838 MIR4754-201ENST00000582477 89 ntBASIC14.18□□□□□ -0.14
NFKB1P19838 AC020922.3-201ENST00000595064 547 ntBASIC14.18□□□□□ -0.14
NFKB1P19838 AL356740.1-201ENST00000602192 1297 ntBASIC14.18□□□□□ -0.14
NFKB1P19838 AP001505.2-201ENST00000616815 443 ntBASIC14.18□□□□□ -0.14
NFKB1P19838 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NFKB1P19838 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.18□□□□□ -0.14
NFKB1P19838 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NFKB1P19838 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NFKB1P19838 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NFKB1P19838 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 NRADDP-202ENST00000641269 1585 ntBASIC14.17□□□□□ -0.14
NFKB1P19838 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.17□□□□□ -0.14
NFKB1P19838 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.17□□□□□ -0.14
NFKB1P19838 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.17□□□□□ -0.14
NFKB1P19838 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NFKB1P19838 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NFKB1P19838 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms