Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
DEFA4P12838 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
DEFA4P12838 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
DEFA4P12838 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.42□□□□□ -0.58
DEFA4P12838 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.42□□□□□ -0.58
DEFA4P12838 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
DEFA4P12838 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.42□□□□□ -0.58
DEFA4P12838 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC11.42□□□□□ -0.58
DEFA4P12838 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
DEFA4P12838 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
DEFA4P12838 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC11.42□□□□□ -0.58
DEFA4P12838 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.42□□□□□ -0.58
DEFA4P12838 AC005034.1-201ENST00000426657 489 ntBASIC11.42□□□□□ -0.58
DEFA4P12838 AC026954.1-201ENST00000429771 1293 ntBASIC11.42□□□□□ -0.58
DEFA4P12838 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.42□□□□□ -0.58
DEFA4P12838 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.42□□□□□ -0.58
DEFA4P12838 GAPDHP21-201ENST00000450301 1010 ntBASIC11.42□□□□□ -0.58
DEFA4P12838 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.42□□□□□ -0.58
DEFA4P12838 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
DEFA4P12838 HNRNPA1P48-202ENST00000565308 961 ntBASIC11.42□□□□□ -0.58
DEFA4P12838 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC11.42□□□□□ -0.58
DEFA4P12838 AL512343.1-201ENST00000605837 169 ntBASIC11.42□□□□□ -0.58
DEFA4P12838 AC244157.2-201ENST00000616239 1006 ntBASIC11.42□□□□□ -0.58
DEFA4P12838 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC11.42□□□□□ -0.58
DEFA4P12838 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
DEFA4P12838 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.42□□□□□ -0.58
DEFA4P12838 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.42□□□□□ -0.58
DEFA4P12838 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.42□□□□□ -0.58
DEFA4P12838 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
DEFA4P12838 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
DEFA4P12838 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
DEFA4P12838 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.42□□□□□ -0.58
DEFA4P12838 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
DEFA4P12838 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
DEFA4P12838 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC11.41□□□□□ -0.58
DEFA4P12838 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.41□□□□□ -0.58
DEFA4P12838 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.41□□□□□ -0.58
DEFA4P12838 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
DEFA4P12838 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
DEFA4P12838 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
DEFA4P12838 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
DEFA4P12838 AP003969.2-201ENST00000623739 2275 ntBASIC11.41□□□□□ -0.58
DEFA4P12838 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
DEFA4P12838 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 GSAP-205ENST00000430584 600 ntTSL 5 BASIC11.41□□□□□ -0.58
DEFA4P12838 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.41□□□□□ -0.58
DEFA4P12838 GPR53P-205ENST00000457298 1084 ntBASIC11.41□□□□□ -0.58
DEFA4P12838 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.41□□□□□ -0.58
DEFA4P12838 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11.41□□□□□ -0.58
DEFA4P12838 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.41□□□□□ -0.58
DEFA4P12838 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms