Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AC025062.2-201ENST00000605477 670 ntBASIC11.09□□□□□ -0.63
APOC3P02656 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC3P02656 MIR1199-201ENST00000621445 119 ntBASIC11.09□□□□□ -0.63
APOC3P02656 AC107918.4-202ENST00000641623 219 ntBASIC11.09□□□□□ -0.63
APOC3P02656 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC3P02656 SLC5A11-209ENST00000567758 2246 ntTSL 5 BASIC11.09□□□□□ -0.63
APOC3P02656 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC3P02656 SPATA13-205ENST00000409126 2111 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC3P02656 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC3P02656 STAC2-201ENST00000333461 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC3P02656 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC3P02656 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC11.09□□□□□ -0.63
APOC3P02656 VPS33A-201ENST00000267199 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC3P02656 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC3P02656 SLC2A4-201ENST00000317370 3426 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC3P02656 CNGB1-204ENST00000564448 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC3P02656 AC009093.10-201ENST00000641956 1442 ntBASIC11.09□□□□□ -0.63
APOC3P02656 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC3P02656 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC3P02656 GOLGA2P1-201ENST00000512938 2906 ntBASIC11.08□□□□□ -0.63
APOC3P02656 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
APOC3P02656 SLC4A1AP-206ENST00000618046 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 AC008040.5-201ENST00000599781 1781 ntBASIC11.08□□□□□ -0.64
APOC3P02656 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 PCSK1-202ENST00000508626 2234 ntTSL 2 BASIC11.08□□□□□ -0.64
APOC3P02656 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
APOC3P02656 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC11.08□□□□□ -0.64
APOC3P02656 MAB21L2-201ENST00000317605 2772 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
APOC3P02656 C2CD2-201ENST00000329623 5844 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 MUC4-203ENST00000346145 3982 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 AC068775.1-201ENST00000322446 2142 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 ZNF213-AS1-204ENST00000572691 3232 ntTSL 5 BASIC11.08□□□□□ -0.64
APOC3P02656 AC243964.3-201ENST00000623022 2028 ntBASIC11.08□□□□□ -0.64
APOC3P02656 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
APOC3P02656 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 RSU1-201ENST00000345264 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.08□□□□□ -0.64
APOC3P02656 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.08□□□□□ -0.64
APOC3P02656 BX284668.4-201ENST00000453917 508 ntBASIC11.08□□□□□ -0.64
APOC3P02656 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.08□□□□□ -0.64
APOC3P02656 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.08□□□□□ -0.64
APOC3P02656 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.08□□□□□ -0.64
APOC3P02656 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
APOC3P02656 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.08□□□□□ -0.64
APOC3P02656 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.08□□□□□ -0.64
APOC3P02656 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
APOC3P02656 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
APOC3P02656 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.08□□□□□ -0.64
APOC3P02656 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.08□□□□□ -0.64
APOC3P02656 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.08□□□□□ -0.64
APOC3P02656 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 TP53-222ENST00000617185 2724 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 DDI1-201ENST00000302259 2609 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
APOC3P02656 ATP2A1-201ENST00000357084 3532 ntTSL 2 BASIC11.08□□□□□ -0.64
APOC3P02656 AC009093.2-202ENST00000620513 2079 ntBASIC11.08□□□□□ -0.64
APOC3P02656 FAM110B-201ENST00000361488 3438 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
APOC3P02656 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC11.08□□□□□ -0.64
APOC3P02656 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 BCAS3-202ENST00000407086 3496 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 DAPK1-213ENST00000491893 4186 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.08□□□□□ -0.64
APOC3P02656 RPH3A-201ENST00000389385 4679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC3P02656 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
APOC3P02656 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC3P02656 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.07□□□□□ -0.64
APOC3P02656 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 DNAJB14-205ENST00000442697 6075 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 OR10H5-202ENST00000642092 7044 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
APOC3P02656 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
APOC3P02656 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 ETFDH-206ENST00000511912 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 PCDHGB4-202ENST00000615384 4725 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
APOC3P02656 OSBP2-204ENST00000407373 3669 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
APOC3P02656 C16orf82-202ENST00000505035 2459 ntAPPRIS P5 BASIC11.07□□□□□ -0.64
APOC3P02656 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 SPRTN-204ENST00000391858 3559 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
APOC3P02656 ZNF75D-201ENST00000370764 2977 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
APOC3P02656 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
APOC3P02656 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms