Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CCDC187A0A096LP49 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCDC187A0A096LP49 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 AC113367.3-201ENST00000508316 1912 ntBASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 AC106827.1-201ENST00000366454 431 ntBASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 AC041040.1-201ENST00000425197 460 ntBASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 IFNWP2-201ENST00000431203 580 ntBASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 BCRP4-201ENST00000506079 804 ntBASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC187A0A096LP49 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 AL137244.1-201ENST00000422931 865 ntBASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 CDCA4P4-201ENST00000435216 680 ntBASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 AC025594.1-201ENST00000469533 543 ntBASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 AC104212.2-201ENST00000478813 628 ntBASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC187A0A096LP49 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 HSPA8P5-201ENST00000456928 2069 ntBASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms