Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM17Q9Y577 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM17Q9Y577 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM17Q9Y577 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 SNX18-202ENST00000343017 3140 ntBASIC15.55■□□□□ 0.08
TRIM17Q9Y577 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 DLX4-206ENST00000611342 1662 ntBASIC15.55■□□□□ 0.08
TRIM17Q9Y577 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 HLA-DQB3-203ENST00000425319 356 ntBASIC15.55■□□□□ 0.08
TRIM17Q9Y577 IQCF4-203ENST00000428561 420 ntBASIC15.55■□□□□ 0.08
TRIM17Q9Y577 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 RPL29P2-202ENST00000498671 657 ntBASIC15.55■□□□□ 0.08
TRIM17Q9Y577 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC15.55■□□□□ 0.08
TRIM17Q9Y577 MIR6165-201ENST00000614803 84 ntBASIC15.55■□□□□ 0.08
TRIM17Q9Y577 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 AC018529.2-202ENST00000611482 3087 ntBASIC15.55■□□□□ 0.08
TRIM17Q9Y577 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM17Q9Y577 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 AC138035.3-201ENST00000622706 2791 ntBASIC15.54■□□□□ 0.08
TRIM17Q9Y577 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 MIR766-201ENST00000390223 111 ntBASIC15.54■□□□□ 0.08
TRIM17Q9Y577 TUBB8P9-201ENST00000422534 1276 ntBASIC15.54■□□□□ 0.08
TRIM17Q9Y577 TUBB8P10-201ENST00000430210 1279 ntBASIC15.54■□□□□ 0.08
TRIM17Q9Y577 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 RPSAP16-201ENST00000447583 821 ntBASIC15.54■□□□□ 0.08
TRIM17Q9Y577 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 KRT18P42-201ENST00000505048 1255 ntBASIC15.54■□□□□ 0.08
TRIM17Q9Y577 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM17Q9Y577 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 AC015813.5-201ENST00000624641 1514 ntBASIC15.53■□□□□ 0.08
TRIM17Q9Y577 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms