Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 PTPRVP-205ENST00000641549 5067 ntBASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 MIR645-201ENST00000385283 94 ntBASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 AL355334.1-201ENST00000417713 215 ntBASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 AL354861.1-201ENST00000445213 355 ntBASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 CR383656.3-201ENST00000551315 183 ntBASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA1Q9UND3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 ERP29P1-201ENST00000442902 706 ntBASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 AC114501.1-201ENST00000445949 172 ntBASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 AC004837.1-201ENST00000446267 564 ntBASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 PIN4P1-201ENST00000451079 396 ntBASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 CTBP2P4-201ENST00000513884 920 ntBASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 IGHV3-37-201ENST00000518544 340 ntBASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 AL157996.1-201ENST00000624684 2299 ntBASIC12.92□□□□□ -0.34
NPIPA1Q9UND3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms