Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 AL591122.2-201ENST00000624125 1853 ntBASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC00474Q9P2X8 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AL359881.3-201ENST00000602640 1721 ntBASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AC152010.1-201ENST00000415779 2006 ntBASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AC099521.2-201ENST00000619354 2036 ntBASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AC027020.2-201ENST00000602585 2389 ntBASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 SMS-201ENST00000379404 1174 ntTSL 3 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 KRT18P15-201ENST00000458108 1291 ntBASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 KRT8P13-201ENST00000463294 1010 ntBASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 HLA-J-204ENST00000495278 958 ntBASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AC003686.1-201ENST00000550956 1034 ntBASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 PAM16-211ENST00000575848 518 ntTSL 3 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 MIR3188-201ENST00000583494 85 ntBASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AC068587.8-201ENST00000641239 219 ntBASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AC134407.3-201ENST00000624035 2139 ntBASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 AL365181.3-201ENST00000605886 3222 ntBASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC9.22□□□□□ -0.93
LINC00474Q9P2X8 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC9.21□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms