Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRFN1Q9P244 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 OR52M2P-201ENST00000414298 959 ntBASIC12.83□□□□□ -0.36
LRFN1Q9P244 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 PRSS3P1-201ENST00000503996 742 ntBASIC12.83□□□□□ -0.36
LRFN1Q9P244 AC226150.1-201ENST00000544259 466 ntBASIC12.83□□□□□ -0.36
LRFN1Q9P244 VENTXP3-201ENST00000546480 773 ntBASIC12.83□□□□□ -0.36
LRFN1Q9P244 AC138466.5-201ENST00000624002 808 ntBASIC12.83□□□□□ -0.36
LRFN1Q9P244 AC002044.2-201ENST00000624910 970 ntBASIC12.83□□□□□ -0.36
LRFN1Q9P244 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRFN1Q9P244 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRFN1Q9P244 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRFN1Q9P244 AC005252.3-201ENST00000623855 2258 ntBASIC12.83□□□□□ -0.36
LRFN1Q9P244 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRFN1Q9P244 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRFN1Q9P244 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRFN1Q9P244 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRFN1Q9P244 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRFN1Q9P244 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRFN1Q9P244 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.83□□□□□ -0.36
LRFN1Q9P244 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRFN1Q9P244 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRFN1Q9P244 TCAM1P-207ENST00000485295 1537 ntBASIC12.83□□□□□ -0.36
LRFN1Q9P244 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRFN1Q9P244 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 OR2W2P-201ENST00000406313 909 ntBASIC12.82□□□□□ -0.36
LRFN1Q9P244 ACTG1P19-201ENST00000418987 1116 ntBASIC12.82□□□□□ -0.36
LRFN1Q9P244 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 AC084752.1-201ENST00000509766 622 ntBASIC12.82□□□□□ -0.36
LRFN1Q9P244 COQ10BP2-201ENST00000513804 724 ntBASIC12.82□□□□□ -0.36
LRFN1Q9P244 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 CICP16-201ENST00000502609 2813 ntBASIC12.82□□□□□ -0.36
LRFN1Q9P244 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 AC021305.1-201ENST00000520656 1514 ntBASIC12.82□□□□□ -0.36
LRFN1Q9P244 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LRFN1Q9P244 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRFN1Q9P244 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRFN1Q9P244 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.81□□□□□ -0.36
LRFN1Q9P244 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRFN1Q9P244 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRFN1Q9P244 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LRFN1Q9P244 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LRFN1Q9P244 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRFN1Q9P244 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LRFN1Q9P244 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms