Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 AC026954.1-201ENST00000429771 1293 ntBASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 AC078875.1-201ENST00000431907 724 ntBASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 GAPDHP21-201ENST00000450301 1010 ntBASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 AC093752.3-201ENST00000567343 901 ntBASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 RN7SL455P-201ENST00000580629 282 ntBASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 AC091271.1-201ENST00000611877 1162 ntBASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 AL022323.5-201ENST00000624101 2059 ntBASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 AC245140.2-201ENST00000624054 1939 ntBASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 AC007279.1-201ENST00000448547 837 ntBASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 AL023803.2-201ENST00000620080 638 ntBASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 IL9RP3-201ENST00000442856 1674 ntBASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHACTR1Q9C0D0 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms