Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.11□□□□□ -0.31
AMBRA1Q9C0C7 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AMBRA1Q9C0C7 AC144522.1-201ENST00000625111 1658 ntBASIC13.11□□□□□ -0.31
AMBRA1Q9C0C7 AC110048.1-201ENST00000604293 2157 ntBASIC13.11□□□□□ -0.31
AMBRA1Q9C0C7 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AMBRA1Q9C0C7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AMBRA1Q9C0C7 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
AMBRA1Q9C0C7 LINC00115-201ENST00000473798 1317 ntBASIC13.11□□□□□ -0.31
AMBRA1Q9C0C7 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AMBRA1Q9C0C7 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.11□□□□□ -0.31
AMBRA1Q9C0C7 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.11□□□□□ -0.31
AMBRA1Q9C0C7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 SNORA50C-201ENST00000408535 133 ntBASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 AC079178.1-201ENST00000420915 656 ntBASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 PGAM1P5-201ENST00000548011 764 ntBASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 SNORA50.1-201ENST00000628590 135 ntBASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 AC131902.2-201ENST00000566892 2172 ntBASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AMBRA1Q9C0C7 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 MIR1908-201ENST00000410394 80 ntBASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 AC092580.1-201ENST00000433998 658 ntBASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 Z93015.1-201ENST00000451718 390 ntBASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 AC006122.1-201ENST00000493323 440 ntBASIC13.09□□□□□ -0.31
AMBRA1Q9C0C7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms