Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 HNRNPA3P6-201ENST00000472163 1006 ntBASIC16.73■□□□□ 0.27
EYA3Q99504 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC16.73■□□□□ 0.27
EYA3Q99504 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.73■□□□□ 0.27
EYA3Q99504 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.73■□□□□ 0.27
EYA3Q99504 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC16.73■□□□□ 0.27
EYA3Q99504 BX322534.1-201ENST00000635574 241 ntBASIC16.73■□□□□ 0.27
EYA3Q99504 AC215524.1-201ENST00000635696 241 ntBASIC16.73■□□□□ 0.27
EYA3Q99504 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
EYA3Q99504 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
EYA3Q99504 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.73■□□□□ 0.27
EYA3Q99504 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.73■□□□□ 0.27
EYA3Q99504 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EYA3Q99504 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EYA3Q99504 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
EYA3Q99504 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EYA3Q99504 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.73■□□□□ 0.27
EYA3Q99504 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
EYA3Q99504 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.73■□□□□ 0.27
EYA3Q99504 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EYA3Q99504 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EYA3Q99504 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
EYA3Q99504 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
EYA3Q99504 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.72■□□□□ 0.27
EYA3Q99504 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 CCL19-202ENST00000378800 414 ntTSL 2 BASIC16.72■□□□□ 0.27
EYA3Q99504 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC16.72■□□□□ 0.27
EYA3Q99504 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC16.72■□□□□ 0.27
EYA3Q99504 PHBP10-201ENST00000416467 784 ntBASIC16.72■□□□□ 0.27
EYA3Q99504 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 PGK1P2-201ENST00000431702 1214 ntBASIC16.72■□□□□ 0.27
EYA3Q99504 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.72■□□□□ 0.27
EYA3Q99504 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC16.72■□□□□ 0.27
EYA3Q99504 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC16.72■□□□□ 0.27
EYA3Q99504 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC16.72■□□□□ 0.27
EYA3Q99504 AC006116.2-201ENST00000589958 988 ntBASIC16.72■□□□□ 0.27
EYA3Q99504 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
EYA3Q99504 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC16.72■□□□□ 0.27
EYA3Q99504 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC16.72■□□□□ 0.27
EYA3Q99504 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
EYA3Q99504 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC16.72■□□□□ 0.27
EYA3Q99504 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.72■□□□□ 0.27
EYA3Q99504 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.72■□□□□ 0.27
EYA3Q99504 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.72■□□□□ 0.27
EYA3Q99504 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.72■□□□□ 0.27
EYA3Q99504 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EYA3Q99504 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.72■□□□□ 0.27
EYA3Q99504 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.71■□□□□ 0.27
EYA3Q99504 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EYA3Q99504 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
EYA3Q99504 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EYA3Q99504 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EYA3Q99504 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
EYA3Q99504 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EYA3Q99504 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
EYA3Q99504 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.71■□□□□ 0.27
EYA3Q99504 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EYA3Q99504 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EYA3Q99504 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EYA3Q99504 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EYA3Q99504 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
EYA3Q99504 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EYA3Q99504 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
EYA3Q99504 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
EYA3Q99504 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.71■□□□□ 0.27
EYA3Q99504 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.71■□□□□ 0.27
EYA3Q99504 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EYA3Q99504 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EYA3Q99504 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.71■□□□□ 0.27
EYA3Q99504 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
EYA3Q99504 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
EYA3Q99504 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC16.71■□□□□ 0.27
EYA3Q99504 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC16.71■□□□□ 0.27
EYA3Q99504 HNRNPA3P12-201ENST00000437410 1063 ntBASIC16.71■□□□□ 0.27
EYA3Q99504 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC16.71■□□□□ 0.27
EYA3Q99504 AP000533.1-201ENST00000456143 1177 ntBASIC16.71■□□□□ 0.27
EYA3Q99504 AC147876.1-201ENST00000504408 322 ntBASIC16.71■□□□□ 0.27
EYA3Q99504 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.71■□□□□ 0.27
EYA3Q99504 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC16.71■□□□□ 0.27
EYA3Q99504 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC16.71■□□□□ 0.27
EYA3Q99504 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms