Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.32■□□□□ 0.2
TRIM47Q96LD4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 AC092862.1-201ENST00000541534 533 ntBASIC16.32■□□□□ 0.2
TRIM47Q96LD4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 FTLP5-201ENST00000586853 534 ntBASIC16.32■□□□□ 0.2
TRIM47Q96LD4 AL021707.6-201ENST00000609212 491 ntBASIC16.32■□□□□ 0.2
TRIM47Q96LD4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 CICP16-201ENST00000502609 2813 ntBASIC16.32■□□□□ 0.2
TRIM47Q96LD4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM47Q96LD4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 BRI3P1-201ENST00000440440 378 ntBASIC16.31■□□□□ 0.2
TRIM47Q96LD4 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 RN7SL375P-201ENST00000492442 298 ntBASIC16.31■□□□□ 0.2
TRIM47Q96LD4 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 MIR6074-201ENST00000612054 107 ntBASIC16.31■□□□□ 0.2
TRIM47Q96LD4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM47Q96LD4 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms