Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.05■□□□□ -0
LRCH3Q96II8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.05■□□□□ -0
LRCH3Q96II8 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
LRCH3Q96II8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.05■□□□□ -0
LRCH3Q96II8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LRCH3Q96II8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRCH3Q96II8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRCH3Q96II8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LRCH3Q96II8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
LRCH3Q96II8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LRCH3Q96II8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
LRCH3Q96II8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRCH3Q96II8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.04■□□□□ -0
LRCH3Q96II8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.04■□□□□ -0
LRCH3Q96II8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.04■□□□□ -0
LRCH3Q96II8 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LRCH3Q96II8 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.04■□□□□ -0
LRCH3Q96II8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LRCH3Q96II8 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.04■□□□□ -0
LRCH3Q96II8 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.04■□□□□ -0
LRCH3Q96II8 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 OR7E12P-201ENST00000344740 973 ntBASIC15.04■□□□□ -0
LRCH3Q96II8 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC15.04■□□□□ -0
LRCH3Q96II8 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 RN7SL33P-201ENST00000462543 342 ntBASIC15.04■□□□□ -0
LRCH3Q96II8 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 AF186996.6-201ENST00000485294 149 ntBASIC15.04■□□□□ -0
LRCH3Q96II8 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC15.04■□□□□ -0
LRCH3Q96II8 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC15.04■□□□□ -0
LRCH3Q96II8 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC15.04■□□□□ -0
LRCH3Q96II8 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC15.04■□□□□ -0
LRCH3Q96II8 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LRCH3Q96II8 MIR6165-201ENST00000614803 84 ntBASIC15.04■□□□□ -0
LRCH3Q96II8 GAPDHP74-202ENST00000632456 782 ntBASIC15.04■□□□□ -0
LRCH3Q96II8 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LRCH3Q96II8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
LRCH3Q96II8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.04■□□□□ -0
LRCH3Q96II8 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.04■□□□□ -0
LRCH3Q96II8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.04■□□□□ -0
LRCH3Q96II8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCH3Q96II8 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH3Q96II8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH3Q96II8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LRCH3Q96II8 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC15.03■□□□□ -0
LRCH3Q96II8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH3Q96II8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH3Q96II8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.03■□□□□ -0
LRCH3Q96II8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH3Q96II8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.03■□□□□ -0
LRCH3Q96II8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.03■□□□□ -0
LRCH3Q96II8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.03■□□□□ -0
LRCH3Q96II8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.03■□□□□ -0
LRCH3Q96II8 AC140479.7-201ENST00000636301 2332 ntBASIC15.03■□□□□ -0
LRCH3Q96II8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.03■□□□□ -0
LRCH3Q96II8 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
LRCH3Q96II8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRCH3Q96II8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH3Q96II8 POP5-201ENST00000341039 913 ntTSL 2 BASIC15.03■□□□□ -0
LRCH3Q96II8 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRCH3Q96II8 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC15.03■□□□□ -0
LRCH3Q96II8 KRT18P33-201ENST00000398525 1043 ntBASIC15.03■□□□□ -0
LRCH3Q96II8 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC15.03■□□□□ -0
LRCH3Q96II8 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRCH3Q96II8 AC233724.9-201ENST00000511694 407 ntBASIC15.03■□□□□ -0
LRCH3Q96II8 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC15.03■□□□□ -0
LRCH3Q96II8 RPL10P8-201ENST00000522888 313 ntBASIC15.03■□□□□ -0
LRCH3Q96II8 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC15.03■□□□□ -0
LRCH3Q96II8 AC023051.2-201ENST00000541141 460 ntBASIC15.03■□□□□ -0
LRCH3Q96II8 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC15.03■□□□□ -0
LRCH3Q96II8 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC15.03■□□□□ -0
LRCH3Q96II8 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
LRCH3Q96II8 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.03■□□□□ -0
LRCH3Q96II8 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LRCH3Q96II8 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC15.03■□□□□ -0
LRCH3Q96II8 AC123912.6-201ENST00000612657 315 ntBASIC15.03■□□□□ -0
LRCH3Q96II8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
LRCH3Q96II8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH3Q96II8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH3Q96II8 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms