Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 ODCP-201ENST00000459650 1639 ntBASIC12.24□□□□□ -0.45
TMEM54Q969K7 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 IGLV3-15-201ENST00000518356 244 ntBASIC12.24□□□□□ -0.45
TMEM54Q969K7 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 AC138701.2-201ENST00000553634 226 ntBASIC12.24□□□□□ -0.45
TMEM54Q969K7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 AC084346.2-201ENST00000607097 949 ntBASIC12.24□□□□□ -0.45
TMEM54Q969K7 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 AC091769.1-201ENST00000619576 568 ntBASIC12.24□□□□□ -0.45
TMEM54Q969K7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 PPT1-213ENST00000641319 2388 ntBASIC12.24□□□□□ -0.45
TMEM54Q969K7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM54Q969K7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
TMEM54Q969K7 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 ERP29P1-201ENST00000442902 706 ntBASIC12.23□□□□□ -0.45
TMEM54Q969K7 IMP3P2-201ENST00000489760 475 ntBASIC12.23□□□□□ -0.45
TMEM54Q969K7 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 MIR4522-201ENST00000584932 87 ntBASIC12.23□□□□□ -0.45
TMEM54Q969K7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 AC012073.1-201ENST00000606114 1108 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms